Saturday, August 22, 2015

[Herpetology • 2015] Cryptotriton xucaneborum • Biogeography and Evolution of Central American Cloud Forest Salamanders (Caudata: Plethodontidae: Cryptotriton), with the Description of A New Species


Cryptotriton xucaneborum
Rovito, Vásquez-Almazán, Papenfuss, Parra-Olea & Wake, 2015
Figure 6. (A) Holotype of Cryptotriton xucaneborum in life. (B) Ventral view of holotype showing dark grey ventral coloration.(D) View of type locality of C. xucaneborum, showing small forest fragment surrounded by agricultural land. (E) Habitat where holotype of C. xucaneborum was collected.

The cloud forests of Mesoamerica are notable for their high endemism, and plethodontid salamanders provide a striking example of divergence and microendemism across cloud forest blocks at a regional level. Salamanders that make use of arboreal bromeliad microhabitats in the cloud forest appear to be especially prone to divergence driven by natural habitat fragmentation, and are expected to show high endemism at small spatial scales. We use a multilocus dataset to investigate the biogeographic history and relationships among species of a small genus of salamander, Cryptotriton, restricted to the cloud forests of Nuclear Central America. We use a morphological data set along with a coalescent species delimitation method to reveal the presence of at least one undescribed species from an isolated cloud forest in eastern Guatemala. Biogeographic analyses show that Cryptotriton has a different biogeographic history than another clade of cloud forest-restricted salamanders in the same region, perhaps indicating that each genus restricted the spatial expansion and diversification of the other through preemptive occupancy. Our results suggest that isolation across relatively short geographic distances has led to range fragmentation and deep divergence between species. Exploration of remaining patches of cloud forest likely will continue to reveal undetected diversity.

Keywords: bolitoglossine salamander; Chiapas; Guatemala; Honduras; microendemism; molecular phylogenetics; morphology; species delimitation; species tree


Cryptotriton xucaneborum, new species
Sierra de Xucaneb Hidden Salamander
Salamandra Escondida de la Sierra de Xucaneb
Cryptotriton veraepacis McCranie and Rovito, 2014 (part)
Cryptotriton veraepacis Vásquez-Almazán et al. 2009 (part)
Cryptotriton veraepacis Lynch and Wake, 1978 (part)

........  DOI: 10.1111/zoj.12268

Figure 6. (A) Holotype of Cryptotriton xucaneborum in life. (B) Ventral view of holotype showing dark grey ventral coloration. (C) Ventral view of an individual of Cryptotriton veraepacis (USAC 1920) showing lighter grey ventral coloration. (D) View of type locality of C. xucaneborum, showing small forest fragment surrounded by agricultural land. (E) Habitat where holotype of C. xucaneborum was collected.

Habitat and distribution. – Known only from two localities separated by 22 km in the Sierra de Xucaneb, Alta Verapaz, Guatemala. The species may occur at a few other points of relatively high elevation in the Sierra de Xucaneb, but extensive deforestation in most areas has eliminated what may have once been suitable habitat for the species. The holotype was found in an arboreal bromeliad, while the four paratypes from Chelemhá were found active at night on vegetation 1–2 m above the ground. The forest at Finca Volcán represents a transition from lower elevation forest to cloud forest, with relatively few bromeliads and other epiphyte growth, and is classified as subtropical rainforest (Holdridge, 1967), while habitat at Chelemhá is lower montane rain forest (Holdridge, 1967) with typical cloud forest vegetation and extensive epiphyte cover. The only syntopic species of salamander known to occur with Cryptotriton xucaneborum is Bolitoglossa helmrichi, which occurs at both known sites.


Sean M. Rovito, Carlos R. Vásquez-Almazán, Theodore J. Papenfuss, Gabriela Parra-Olea and David B. Wake. 2015. Biogeography and Evolution of Central American Cloud Forest Salamanders (Caudata: Plethodontidae: Cryptotriton), with the Description of A New Species. Zoological Journal of the Linnean Society. 175(1); 150–166.  DOI: 10.1111/zoj.12268

[Herpetology • 2014] Cryptotriton necopinus • New Species of Salamander (Caudata: Plethodontidae: Cryptotriton) from Quebrada Cataguana, Francisco Morazán, Honduras, with comments on the taxonomic status of Cryptotriton wakei


Cryptotriton necopinus  McCranie & Rovito, 2014
FIGURE 1. Adult male holotype of Cryptotriton necopinus sp. nov. (MVZ 269392), SVL 26.4 mm.
FIGURE 2.
 Adult male holotype of Cryptotriton necopinus sp. nov., showing the nostril opening color in life.

Photographs: J.R. McCranie
FIGURE 3. Map of southern Mexico, Guatemala, and western Honduras showing the known collecting localities for the species of Cryptotriton. || DOI: 10.11646/zootaxa.3795.1.6

Abstract
We describe a new species of the plethodontid salamander genus Cryptotriton from Honduras after comparing morphological, molecular, and osteological data from the holotype to that of the other nominal forms of the genus. The new species differs from all of the known species of Cryptotriton in at least one character from all three datasets. We also suggest placing C. wakei in the synonymy of C. nasalis after examining the morphological and osteological characters of the single known specimen of C. wakei.

Keywords: Honduras, Plethodontidae, Cryptotriton necopinus sp. nov., morphology, mtDNA, 16S, cytochrome b, Cryptotriton wakei synonym nov., Cryptotriton nasalis


FIGURE 3. Map of southern Mexico, Guatemala, and western Honduras showing the known collecting localities for the species of Cryptotriton.

Systematics
Cryptotriton necopinus sp. nov.
Cataguana Hidden Salamander | Salamandra Escondida de Cataguana

Etymology. The specific name necopinus is a Latin adjective for unexpected. That name has two meanings in connection with the finding of this new species. Firstly, finding a member of Cryptotriton about 125 km SE of its previous eastern most known locality was certainly unexpected. Secondly, a group of seven collectors had spent six days and five nights in the area searching for amphibians and reptiles during March 2007 (Townsend et al. 2007) and at least two of those collectors had spent about a week in the area during 2006 (Townsend & Wilson 2009, Townsend et al. 2009). Thus, it was also unexpected to find an undescribed salamander species at the locality in such a short time period (two days and nights) after so many productive man-hours were previously spent there.

FIGURE 1. Adult male holotype of Cryptotriton necopinus sp. nov. (MVZ 269392), SVL 26.4 mm. 
FIGURE 2. Adult male holotype of Cryptotriton necopinus sp. nov. (MVZ 269392), showing the nostril opening color in life.
Photograph by J.R. McCranie.
FIGURE 3. Map of southern Mexico, Guatemala, and western Honduras showing the known collecting localities for the species of Cryptotriton. || DOI: 10.11646/zootaxa.3795.1.6


James McCranie and Sean Rovito. 2014. New Species of Salamander (Caudata: Plethodontidae: Cryptotriton) from Quebrada Cataguana, Francisco Morazán, Honduras, with comments on the taxonomic status of Cryptotriton wakei. Zootaxa. 3795(1): 061–070.   DOI: 10.11646/zootaxa.3795.1.6

[Herpetology • 2009] Cryptotriton sierraminensis • A New Species of Cryptotriton (Caudata: Plethodontidae) from eastern Guatemala


Cryptotriton sierraminensis
Vásquez-Almazán, Rovito, Good & Wake, 2009
Fig. 2. (A) Dorsal view of the holotype of Cryptotriton sierraminensis , with inset showing view of head. (B) Ventral view of a paratype (USAC 1118), showing characteristic yellow coloration.

Abstract 
 A new species of lungless salamander (Plethodontidae) is described from the mountains of eastern Guatemala. The new species is distinguished from all other members of its genus by its yellow ventral coloration. It is geographically closest to its sister taxon, Cryptotriton veraepacis, from which it differs in several osteological features as well as nostril size and shape. Molecular analyses with allozyme loci and mitochondrial DNA also support its distinctiveness from C. veraepacis. This miniaturized species inhabits cloud forest habitats and has been found most commonly in bromeliads.


Fig. 1. Map of known localities for Cryptotriton adelos (crosses), C. alvarezdeltoroi (diamonds) in Mexico, C. veraepacis (squares), C. sierraminensis (circles), C. monzoni (asterisk), and C. wakei (star) in Guatemala, and C. nasalis (triangles) in Honduras. Light gray shading represents areas between 500 m and 1500 m elevation, and dark gray shading represents areas above 1500 m elevation.

Cryptotriton sierraminensis, new species
Sierra de las Minas Hidden Salamander [Figure 2A, 2B]
Cryptotriton sp. A García-París and Wake, 2000

Life history and ecology.— Cryptotriton sierraminensis is an arboreal, bromeliad-dwelling specialist, as are several other members of its genus (C. veraepacis and C. nasalis: Wake,1987; C. adelos : Papenfuss and Wake, 1987). The salamanders were all collected from inside arboreal bromeliads, as were two clutches of unattended eggs (n = 50 and n = 9, respectively). The number of unattended eggs in the larger clutch suggests communal egg-laying without brooding by adults. This behavior, unusual for tropical plethodontids,has been observed in Nototriton barbouri (McCranie andWilson, 1992). Unattended egg clutches have also been reported in Nototriton picadoi (Good and Wake, 1993; Bruce, 1998), Nototriton guanacaste (Good and Wake, 1993), and Oedipina maritima (García-París and Wake, 2000). Bruce(1998) suggested that the small size of Nototriton may prevent them from effectively defending clutches from predators and that egg desiccation may not be a problem for these cloud forest inhabitants. McCranie and Wilson(1992) also state that, as N. barbouri eggs develop during the wet season, parental care to prevent desiccation may not be necessary. The same may be true in C. veraepacis, as the clutches of eggs were found in July, during the wet season in the Sierra de las Minas. Communal laying of unguarded eggs is also reported in Batrachoseps (Jockusch and Mahoney,1997) and some Hemidactylium (Harris and Gill, 1980).

All specimens have been found at elevations of 1700–2200 m. The habitat is composed of cloud forest in the lower montane moist forest life zone (Holdridge, 1967) with a mixture of large broadleaf and pine trees, as well as tree ferns. Trees are covered in a dense growth of epiphytes and mosses. On Volcán de los Monos, Bolitoglossa helmrichi was found in bromeliads and at Finca Planada de Margot; both B. helmrichi and a second, undescribed species of Bolitoglossa (Larson, 1983; Rovito and Vásquez Almazán, unpubl.) were found along with C. veraepacis in bromeliads. Bolitoglossa meliana was found under ground cover objects at both sites in the 1970s, but has not been seen on recent visits to either site.

Distribution.— Cryptotriton sierraminensis is known from only two localities in Municipio Rio Hondo, Department of Zacapa, Guatemala, which are separated by 18.7 km (by air).Both known localities are on the south side of the Sierra de las Minas, between 1700 m and 2200 m. While the locality on Volcán de los Monos is inside the Sierra de las Minas Biosphere reserve, the type locality is outside the reserve andhas no formal protection at present. The species likely occurs at other sites on the southern side of the Sierra de las Minas. 

Etymology.— The specific epithet is an adjective that makes reference to the Sierra de las Minas, Guatemala, where the species occurs.





 Vásquez-Almazán, C. R.; Rovito, S. M.; Good, D. A. and Wake, D. B. 2009. A New Species of Cryptotriton (Caudata: Plethodontidae) from eastern Guatemala. Copeia. 2009 (2): 313–319. doi: 10.1643/CH-08-086


Resumen
Se describe una nueva especie de la familia Pletodontidae de las montañas del este de Guatemala. Cryptotriton sierraminensis se distingue de todos los otros miembros de su género por su coloración del vientre amarillo. Ésta especie está más cerca geográficamente a su especie hermana, Cryptotriton veraepacis, de la que se distingue por varios aspectos osteológicos y por el tamaño y forma de los orificios nasales. Análisis moleculares con allozimas y ADN mitocondrial apoyan sus diferencias con C. veraepacis. Esta especie miniaturizada vive en los bosques nubosos y ha sido encontrada con mayor frecuencia en bromelias.

 

[Herpetology • 2015] Phylogenetic Systematics of Egg-brooding Frogs (Anura: Hemiphractidae) and the Evolution of Direct Development


FIGURE 1. Representatives of the supraspecific taxa of Hemiphractidae recognized in this study.
 (a) A female of Cryptobatrachus remotus from Venezuela carrying on its back its recently hatched froglets, embryos undergo direct development (photo by FJMR-R); (b) A gravid female of Flectonotus pygmaeus from Venezuela carrying its eggs on a pouch on its back formed by two longitudinal flaps of skin that are adherent middorsally, endotrophic tadpoles hatch from the eggs and complete their development in water (photo by Mauricio Rivera-Correa); (c) An adult of Fritziana goeldi from Brazil (photo by JPP); (d) An adult female of the terrestrial Hemiphractus scutatus from Colombia (photo by SC-F); (e) An adult male of Hemiphractus proboscideus from Peru (photo by Giussepe Gagliardi-Urrutia); (f) A female of Stefania ginesi from Venezuela carrying its eggs on its back, embryos undergo direct development and hatch as froglets (photo by FJMR-R); (g) A female of Gastrotheca albolineata from Brazil carrying its eggs inside an enclosed pouch with a posterior opening, embryos undergo direct development and emerge from the pouch as froglets (photo by JPP); (h) A female of Gastrotheca marsupiata from Peru (photo by JMP); (j) An adult male of Gastrotheca walkeri from Venezuela (photo by FJMR-R).
Castroviejo-Fisher, Padial, De La Riva, et al, 2015. DOI: 10.11646/zootaxa.4004.1.1

Abstract
Egg-brooding frogs (Hemiphractidae) are a group of 105 currently recognized Neotropical species, with a remarkable diversity of developmental modes, from direct development to free-living and exotrophic tadpoles. Females carry their eggs on the back and embryos have unique bell-shaped gills. We inferred the evolutionary relationships of these frogs and used the resulting phylogeny to review their taxonomy and test hypotheses on the evolution of developmental modes and bell-shaped gills. Our inferences relied on a total evidence parsimony analysis of DNA sequences of up to 20 mitochondrial and nuclear genes (analyzed under tree-alignment), and 51 phenotypic characters sampled for 83% of currently valid hemiphractid species. Our analyses rendered a well-resolved phylogeny, with both Hemiphractidae (sister of Athesphatanura) and its six recognized genera being monophyletic. We also inferred novel intergeneric relationships [((Cryptobatrachus, Flectonotus), (Stefania, (Fritziana, (Hemiphractus, Gastrotheca))))], the non-monophyly of all species groups previously proposed within Gastrotheca and Stefania, and the existence of several putative new species within Fritziana and Hemiphractus. Contrary to previous hypotheses, our results support the most recent common ancestor of hemiphractids as a direct-developer. Free-living aquatic tadpoles apparently evolved from direct-developing ancestors three to eight times. Embryos of the sister taxa Cryptobatrachus and Flectonotus share a pair of single gills derived from branchial arch I, while embryos of the clade including the other four genera have two pairs of gills derived from branchial arches I and II respectively. Furthermore, in Gastrotheca the fusion of the two pairs of gills is a putative synapomorphy. We propose a revised taxonomy concordant with our optimal topologies.

Keywords: Amphibia, Cryptobatrachus, Flectonotus, Fritziana, Gastrotheca, gills, Hemiphractus, Neotropics, parsimony, Stefania, taxonomy, total evidence, tree-alignment


 (a) A female of Cryptobatrachus remotus from Venezuela carrying on its back its recently hatched froglets, embryos undergo direct development (photo by FJMR-R); (b) A gravid female of Flectonotus pygmaeus from Venezuela carrying its eggs on a pouch on its back formed by two longitudinal flaps of skin that are adherent middorsally, endotrophic tadpoles hatch from the eggs and complete their development in water (photo by Mauricio Rivera-Correa)
Castroviejo-Fisher, Padial, De La Riva, et al, 2015. DOI: 10.11646/zootaxa.4004.1.1


Castroviejo-Fisher, Santiago, José M. Padial, Ignacio De La Riva, José P. Pombal, Jr., Hélio R. Da Silva, Fernando J. M. Rojas-Runjaic, Esteban Medina-Méndez & Darrel R. Frost. 2015. Phylogenetic Systematics of Egg-brooding Frogs (Anura: Hemiphractidae) and the Evolution of Direct Development. Zootaxa. 4004(1): 1–75. DOI: 10.11646/zootaxa.4004.1.1

[Mammalogy • 2015] The African Golden Cat Caracal aurata: Africa’s Least-known Felid


Fig. 1. Camera trap photographs of (clockwise from bottom left): golden, reddish-brown, grey and black (melanistic) African golden cats. Goldenand reddish-brown are usually considered as one morph (golden/reddish-brown). The photographs of golden and reddish-brown individuals demon-strate the considerable variation within the golden/reddish-brown morph.
Fig. 2. Camera trap photographs of African golden cats from central Gabon (a–c), showing the range of types and extent of spotting that occur inindividuals from the west of the species’ geographic range. Spots are, typically, restricted to the belly and inner legs of golden cats from Kibale, SWUganda, (d) and from other sites east of the Congo River.

Abstract
The African golden cat Caracal aurata is endemic to tropical Africa. It is one of the world's least-studied felids and is considered rare in most of its geographic range. The status of the African golden cat in the wild has never been rigorously assessed, but the species is increasingly threatened by habitat degradation, loss and fragmentation, and by unsustainable hunting.
We describe the African golden cat and review its taxonomy, distribution, ecology, behaviour, threats and conservation status. The information presented here is based on the literature and on new data from the first two intensive field studies on the species (underway in Gabon and Uganda).
The golden cat is phenotypically variable. Within the two main colour morphs, golden/reddish-brown and grey, there is wide variation and intergradation. Both of these morphs occur throughout the species' range. Melanistic and chocolate-brown morphs also occur but are uncommon.
Recent genetic analysis indicates that the golden cat is closely related to the caracal Caracal caracal, and it has, therefore, been changed from the genus Profelis to Caracal.
The golden cat is predominantly terrestrial and cathemeral. Its diet consists mainly of rodents and small ungulates.
Field studies in Gabon and Uganda have established that golden cats can be locally common. They are prone to capture by wire snares, however, and are absent in forests hunted at commercial scales.
Species-focused camera trap surveys are effective for collecting distribution, abundance, population structure, ecological and behavioural data on golden cats.

Keywords: bushmeat; camera trap; conservation; deforestation; Profelis



Introduction
The African golden cat Caracal aurata (hereafter referred to as ‘golden cat’) is a medium-sized felid endemic to tropical Africa, with a confirmed historic distribution from SW Senegal in the west to at least central Kenya in the east (Ray & Butynski 2013). It is typically the second largest carnivore present within this habitat (Bahaa-el-din et al. 2011), though in areas where leopards Panthera pardus have been extirpated, the golden cat is now the ‘top carnivore’ (e.g. in Kibale National Park, SW Uganda; Mills et al. 2012). The golden cat is one of the least-known carnivores in Africa (Ray et al. 2005), and one of the least-studied felids worldwide (Brodie 2009). This species is a forest specialist and is, therefore, vulnerable to forest degradation, loss and fragmentation (Nowell & Jackson 1996). The golden cat is also threatened by unsustainable hunting for bushmeat (Nowell & Jackson 1996, Robinson & Bennett 2000).

Despite these threats, there has been no detailed field research on golden cats until recently. The advent of motion-activated camera traps has resulted in several recent publications on golden cats based on opportunistic camera trap photographs, as well as more species-focused studies (e.g. Aronsen 2010, Bahaa-el-din et al. 2011, Sheil 2011, Mills et al. 2012, Mugerwa et al. 2013, Sheil & Mugerwa 2013).

We aim to collate information about the golden cat in order to identify key knowledge gaps, thereby creating a foundation for future research that will guide conservation planning for this species. We build on the recently published species account in the Mammals of Africa (Ray & Butynski 2013) by providing additional information including new field data from Gabon and Uganda. We describe the golden cat and review its taxonomy, habitat, distribution, ecology, behaviour, reproduction, threats, conservation status, and present opportunities for research and for the implementation of evidence-based conservation measures.

......




Fig. 1. Camera trap photographs of (clockwise from bottom left): golden, reddish-brown, grey and black (melanistic) African golden cats. Goldenand reddish-brown are usually considered as one morph (golden/reddish-brown). The photographs of golden and reddish-brown individuals demon-strate the considerable variation within the golden/reddish-brown morph.
African golden cat with a snare wound around its lower stomach. Many cats are not so lucky to escape.
Photo: David Mills/ Panthera news.mongabay.com

 Camera trap photographs of snare-wounded African golden cats. (a) Back right leg is severed (central Gabon).  

After three years of studying the African Golden Cat Caracal aurata, Laila Bahaa-el-din finally came face to face with one.
Photo: Laila Bahaa-el-din/ Panthera | news.mongabay.com

female African Golden Cat Caracal aurata in the forest of Gabon
Photo: Laila Bahaa-el-din | magazine.africageographic.com


Conclusion
Camera trapping synthesis and survey design recommendations
The African golden cat is the focus of our current camera trap studies in Gabon and Uganda. These studies demonstrate that camera trapping can produce adequate data to assess golden cat distribution, abundance, ecology, behaviour and threats. Camera trapping shows the golden cat to be cathemeral, rather than crepuscular or nocturnal as stated in the literature. Most significantly, camera traps detected golden cats more frequently than expected given the low number of sightings, and preliminary identification of individuals suggests that, in some areas, they may be more abundant than previously thought.

Based on the height of golden cats and their trail use patterns, we recommend that cameras be placed c. 25 cm above the ground and 1.5–2.0 m from the edge of abandoned logging roads, skidder tracks and large game trails, facing the track. This protocol appears to maximize photo-captures of golden cats. Spacing of 600–800 m between trapping stations will ensure recaptures of females at several stations, which may be desirable if density estimation is an aim. It is possible to counteract the small sample area created by such tight camera spacing by placing a subset of the cameras farther apart, to widen the survey area. Analysis of data from differently spaced camera traps has been made possible through the development of spatially explicit capture–recapture models (Borchers & Efford 2008). These models, however, require adequate movement data, both for males and females, through recaptures at different sites. For individual identification, it is advisable to use white-flash cameras that produce clear photographs, and to set the cameras to take several consecutive photographs.

Conservation and future research
The literature review and field studies presented here are intended to guide conservation planning for the golden cat. Use of wire snares can have significant direct and indirect impacts on golden cat populations and has caused extirpation from some areas. Tightening and enforcement of hunting regulations, particularly snaring bans, should be encouraged.

The presence of golden cats in active logging concessions is encouraging and highlights the importance of these areas for the conservation of the species. Requiring logging concessions to be certified helps to secure the conservation value of these areas. Considering that 29% of the forest area in West and Central Africa is designated for extraction while just 16% is designated for conservation (Anonymous 2010), governments should enforce strict regulations for the logging industry so that environmental degradation is minimized in and around exploited areas during and after extraction.


Our camera trap surveys were designed to assess golden cat occurrence and abundance within human land-use areas. Valuable additions to this work would be to conduct camera trap surveys in areas where occurrence is uncertain and to monitor sites in changing landscapes to assess population trends. As studies of the golden cat become more widespread, we encourage and invite collaboration to build a landscape-scale assessment of this little-known species.

Bahaa-el-din, L. Henschel, P. Butyinski, T M. Macdonald, D W. Mills, D. Slotow, R & Hunter, L. 2015. The African Golden Cat Caracal aurata: Africa’s Least-known Felid.
Mammal Review. 63-77. DOI: 10.1111/mam.12033

Feline Unseen: The African Golden Cat

[Mammalogy • 2011] Notes and Records: An Encounter with an African Golden Cat Caracal aurata: One of the World's Least Known Felids


Figure 1. African Golden cat Caracal aurata photographed in Bwindi Impenetrable National Park, at 2400 m, just after rain at 5:40 pm 26 September 2009. The images were taken from a car using a hand-held digital camera
(photographs by Douglas Sheil, Robert Bitariho and Miriam van Heist)  DOI: 10.1111/j.1365-2028.2011.01255.x 

The African golden cat Caracal aurata is Africa’s most poorly known felid and the world’s second least known (Brodie, 2009). It is listed on CITES Appendix II and classified near threatened by IUCN (IUCNRedList.org accessed 2 December 2010). The African golden cat has traditionally been included in the genus Felis or Profelis (full synonyms: Profelis aurata and Felis aurata) but various molecular data confirm it is most closely allied with the Caracal Caracal caracal from which it likely diverged less than two million years ago (Johnson et al., 2006).

The African golden cat is a forest species. It is variable in size (5.5–18 kg), colour (golden, reddish brown and grey) and markings (with varying spots and blotches, Kingdon, 1977 and pers. comm.). It favours forest clearings and secondary regrowth where prey is more accessible (Kingdon, 1977). Animals have seldom been observed in the wild, and we know very little about their ecology and behaviour (Kingdon, 1977; Aronsen, 2009).

Bwindi Impenetrable National Park (‘Bwindi’) is a steeply rugged World Heritage Site of just over 330 km2 in the Kigezi Highlands of Southwest Uganda. The area ranges from 1190 to 2560 m above sea level.

In Africa, two cat species are associated with the interior of humid forests, the leopard, Panthera pardus, and the African golden cat. In Bwindi, the leopard is absent (there is no evidence this species ever occurred in the forest J. Kingdon pers. comm.). The African golden cat is therefore the largest terrestrial carnivore in Bwindi. Local people recognise its presence: cats sometimes kill livestock and cat skins are common heirlooms. The African golden cat is only occasionally and fleetingly seen in the forest – many experienced field staff of the Institute of Tropical Forest Conservation (ITFC) have never seen it (ITFC staff various pers. comm.).

Bwindi was gazetted a Forest Reserve in 1948 and a National Park in 1992. Researchers at ITFC use the higher elevation southern road which cuts through the park as access to Ruhija from Kabale (the nearest major town).

On 26 September 2009, I was driving inside the park heading north to ITFC at Ruhija. It was 5:40 p.m. It had just stopped raining. At about 8 km from Nteko gate, we spotted an animal crouched on the road. The light was poor but we took photographs (Fig. 1). It was a reddish-brown cat with mangy grey fur on its back. It was slightly larger than a domestic cat (4–5 kg). It was eating a long-tailed mouse holding it between its front paws. It occasionally turned to look at us but showed no fear at our proximity. Even at only 10 m away, the cat calmly continued eating for 5 or 6 min. Finally, the cat glanced our way, stood up and jaunted briskly away along the road away from us. After about 30 m, it turned off the road and was lost from sight in the dense vegetation. The colouring and markings seen on the photographs were later enough to confirm that this was a small African golden cat (black behind the ears, white chin and light patches around the eyes, see Fig. 1).

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Figure 1. (a–f) African Golden cat Caracal aurata photographed in Bwindi Impenetrable National Park, at 2400 m, just after rain at 5:40 pm 26 September 2009. The images were taken from a car using a hand-held digital camera
(photographs by Douglas Sheil, Robert Bitariho and Miriam van Heist)


Douglas Sheil. 2011. Notes and Records: An Encounter with an African Golden Cat Caracal aurata: One of the World's Least Known Felids. African Journal of Ecology. 19(3):367–369. DOI: 10.1111/j.1365-2028.2011.01255.x

Thursday, August 20, 2015

[Paleontology • 2015] Pulanesaura eocollum • A New Basal Sauropod from the pre-Toarcian Jurassic of South Africa: Evidence of Niche-Partitioning at the Sauropodomorph–Sauropod Boundary?


Pulanesaura eocollum 
 McPhee, Bonnan, Yates, Neveling & Choiniere, 2015

Abstract
The early evolution of sauropod dinosaurs remains poorly understood, with a paucity of unequivocal sauropod taxa known from the first twenty million years of the Jurassic. Recently, the Early Jurassic of South Africa has yielded an assemblage of dental and post-cranial remains displaying a more apomorphic character suite than any other similarly aged sauropodomorph. These remains are interpreted as a new species of basal sauropod and recovered cladistically as the sister taxon to Vulcanodon +more derived Sauropoda, underscoring its importance for our understanding of this pivotal period of sauropod evolution. Key changes in the dentition, axial skeleton and forelimb of this new species suggest a genuine functional distinction occurring at the sauropodiform-sauropod boundary. With reference to these changes, we propose a scenario in which interdependent refinements of the locomotory and feeding apparatus occurred in tandem with, or were effected by, restrictions in the amount of vertical forage initially available to the earliest sauropods. The hypothesized instance of niche-partitioning between basal sauropodan taxa and higher-browsing non-sauropodan sauropodomorphs may partially explain the rarity of true sauropods in the basal rocks of the Jurassic, while having the added corollary of couching the origins of Sauropoda in terms of an ecologically delimited ‘event’.

Figure 3: Representative bones of Pulanesaura eocollum.
(a) anterior-to-middle cervical vertebrae (BP/1/6199) in left lateral view; (b) holotypic anterior-most dorsal neural arch (BP/1/6882) in left lateral and anterior views; (c) anterior dorsal neural arch (BP/1/6984) in anterior and right lateral views; (d) anterior mid-dorsal neural arch (BP/1/6183) in anterior and right lateral views; (e) middle dorsal neural arch (BP/1/6770) in posterior view; (f) anterior caudal vertebra (BP/1/6646) in right lateral and posterior views; (g) right humerus (BP/1/6193) in anterior view; (h) left ulna (BP/1/6210) in lateral and proximal views; (i) ?left clavicle (BP/1/6752) in dorsal view; (j) left pedal ungual I (BP/1/6186) in proximal and medial views; (k) left tibia (BP/1/6200) in anterior and lateral views; (l) right ischium (reversed) (BP/1/7366) in lateral view.
Abbreviations: aidf, anterior infradiapophyseal fossa; ain, anterior incline of the neural spine; ep, epipophysis; hyp, hyposphene; mr, medial ridge; pp, parapophysis; prdl, prezygodiapophyseal lamina; prz, prezygapophyses; rf, radial fossa; spol, spinopostzygapophyseal lamina; vc, ventral convexity. Scale bars equal 5 cm in a-f and i, j; 10 cm in g, h, k, l. Silhouette drawn by BWM Photographs by BWM.

SYSTEMATIC PALAEONTOLOGY

Saurischia Seeley 1888
Sauropodomorpha von Huene 1932
Sauropodiformes Sereno 2007 (sensu)

Sauropoda Marsh 1878

Pulanesaura eocollum gen. et sp. nov.

Holotype: The neural arch of an anterior dorsal vertebra (BP/1/6882) that is missing the dorsal apex of the neural spine.

Type locality and horizon: The Pulanesaura material was obtained from a small (3 m × 3.5 m) quarry on the farm Spion Kop 932 in the Senekal District of the Free State, South Africa (Fig. 1). The quarry is located just over a kilometer East-North East of the holotype locality of Aardonyx celestae, in a higher stratigraphic position than that taxon within the early Jurassic upper Elliot Formation. The much smaller Arcusaurus pereirabalorum was recovered from the edge of the same quarry, and a detailed schematic of the excavation is figured (see also Supplementary Information Fig. S1). The upper Elliot Formation on Spion Kop consists of a series of stacked channel sandstone bodies with little intervening overbank siltstones, the quarry itself being situated in a poorly bedded, coarse to sandy siltstone lens. The two-dimensional geometry and internal facies relationships of this lens suggests that it represents the fill of a low-energy, cut-off channel. Most age estimates suggest that the upper Elliot Formation is no younger than the Pliensbachian (183–191mya), with a consensus range of late Hettangian to Sinemurian (i.e., ~200mya or younger).

Etymology: Pulane”, Sesotho, meaning “rain-maker/bringer”, in reference to the rain-soaked conditions under which the dinosaur was excavated, plus “-saura”, Latin, feminine, meaning “lizard”; “eo”, Greek, meaning “dawn”, plus “collum”, Latin, meaning “neck”, in reference to the hypothesized function of the neck presaging the sauropod condition in the new taxon.



Figure 5: Abbreviated strict consensus tree showing relationships and hypothesised stratigraphic ranges of plateosaurian dinosaurs (sensu).
Dashed lines represent uncertainty in temporal duration. 1, Plateosauridae; 2, Massopoda; 3, Massospondylidae; 4, Sauropodiformes; 5, Sauropoda (node left undesignated in order to reflect current disagreements regarding the taxonomic definition of Sauropoda).

Blair W. McPhee, Matthew F. Bonnan, Adam M. Yates, Johann Neveling and Jonah N. Choiniere. 2015. A New Basal Sauropod from the pre-Toarcian Jurassic of South Africa: Evidence of Niche-Partitioning at the Sauropodomorph–Sauropod Boundary?.
Scientific Reports. 5: 13224; doi: 10.1038/srep13224

Wits PhD student describes new SA dinosaur - the rain lizard http://www.timeslive.co.za/scitech/2015/08/19/Wits-PhD-student-describes-new-SA-dinosaur---the-rain-lizard via @TimesLIVE
Meet Pulanesaura eocollum, a new species of dinosaur http://phy.so/359276567 via @physorg_com

Wednesday, August 19, 2015

[PaleoBotany • 2015] Montsechia vidalii • An Ancient Aquatic Angiosperm


Montsechia vidalii
Gomez, Daviero-Gomez, Coiffard, Martín-Closas & Dilcher, 2015



Significance
The importance of very early aquatic flowering plants is not well understood currently and is poorly documented. Here we present details of the morphology and reproductive biology of Montsechia, an extremely early fossil angiosperm that, because it is so ancient and is totally aquatic, raises questions centered on the very early evolutionary history of flowering plants. This paper challenges the paradigm of how we view the early evolution of basal angiosperms and particularly the role of aquatic habitats in the very early evolution and diversification of flowering plants.

Abstract
The early diversification of angiosperms in diverse ecological niches is poorly understood. Some have proposed an origin in a darkened forest habitat and others an open aquatic or near aquatic habitat. The research presented here centers on Montsechia vidalii, first recovered from lithographic limestone deposits in the Pyrenees of Spain more than 100 y ago. This fossil material has been poorly understood and misinterpreted in the past. Now, based upon the study of more than 1,000 carefully prepared specimens, a detailed analysis of Montsechia is presented. The morphology and anatomy of the plant, including aspects of its reproduction, suggest that Montsechia is sister to Ceratophyllum (whenever cladistic analyses are made with or without a backbone). Montsechia was an aquatic angiosperm living and reproducing below the surface of the water, similar to Ceratophyllum. Montsechia is Barremian in age, raising questions about the very early divergence of the Ceratophyllum clade compared with its position as sister to eudicots in many cladistic analyses. Lower Cretaceous aquatic angiosperms, such as Archaefructus and Montsechia, open the possibility that aquatic plants were locally common at a very early stage of angiosperm evolution and that aquatic habitats may have played a major role in the diversification of some early angiosperm lineages.

Keywords: Montsechia, Ceratophyllum, Archaefructus, aquatic angiosperm, Lower Cretaceous


An artist’s reconstruction of Montsechia vidalii. The plant is thought to have male and female flowers and to have released seeds directly into water to fertilise other plants.
Illustration: O. Sanisidro, B.G., and V.D.-G.  doi: 10.1073/pnas.1509241112

Bernard Gomez, Véronique Daviero-Gomez, Clément Coiffard, Carles Martín-Closas, and David L. Dilcher. 2015. Montsechia, An Ancient Aquatic Angiosperm

​Fossilised remains of world’s oldest flower discovered in Spain
Ancient aquatic plant thought to be world’s first flower; studying it could provide a solution to modern pollination issues linked to decline of bee population

[Herpetology • 2015] Brachycephalus quiririensis • A New Species of Brachycephalus (Anura: Brachycephalidae) from the Quiriri Mountain Range of southern Brazil


Brachycephalus quiririensis
Pie​ & Ribeiro. 2015DOI: 10.7717/PeerJ.1179

Abstract

A new miniaturized toadled of the genus Brachycephalus (Anura: Brachycephalidae) is described from Serra do Quiriri in the municipality of Campo Alegre, Santa Catarina, southern Brazil. Specimens were collected from the leaf litter between from 1,263 and 1,318 m above sea level. The new species is distinguished from all its congeners by the combination of the following characters: snout–vent length 9.9–13.1 mm; skin on head and dorsum without dermal co-ossification; snout mucronate in dorsal view; dorsum rugose; general color brown, with a narrow orange vertebral stripe. The region where the new species is located is also shared with other endemic anuran species and has experienced strong anthropogenic impacts,suggesting that immediate actions should be taken to ensure their long-term preservation.


Etymology. The epithet “quiririensis” is derived from the Tupi-Guarani language word “quiriri” (= silence, peace) and refers to type locality.

Distribution. Brachycephalus quiririensis is known from the type locality, as well as an additional nearby site (Fig. 4) in the municipality of Garuva, state of Santa Catarina (26°01′42″S, 48°57″11″W) (Pie et al., 2013).


Marcio R. Pie​ and Luiz F. Ribeiro. 2015. A New Species of Brachycephalus (Anura: Brachycephalidae) from the Quiriri Mountain Range of southern Brazil. PeerJ. 3:e1179 DOI: 10.7717/PeerJ.1179



Saturday, August 15, 2015

[Botany • 2015] Begonia yapenensis • A New Species (sect. Symbegonia, Begoniaceae) from Papua, Indonesia


Fig. 1. Begonia yapenensis M.Hughes sp. nov. (sect. Symbegonia, Begoniaceae)

cultivated specimen at the Royal Botanic Garden Edinburgh, accession 20090830. 
A. Whole plant showing spreading habit (scale bar = 5 cm). B. Female fl ower and ovary (left, corolla dissected; right, corolla entire) (scale bar = 1 cm). C. Cross section of ovary showing three locules with bilamellate placentae (scale bar = 1 cm). D. Stigmas (scale bar = 5 mm). E. Male fl ower (bottom, corolla dissected; upper, corolla entire; scale bar = 10 cm).

ABSTRACT
 A new species, Begonia yapenensis M.Hughes, in Begonia section Symbegonia (Begoniaceae) is described and diagnosed against Begonia sympapuana. The new species is endemic to Yapen Island, Papua, Indonesia, and is currently known from a single collection.




Mark Hughes, Sadie Barber, Charlie D Heatubun and Janet Gagul. 2015. Begonia yapenensis (sect. Symbegonia, Begoniaceae), A New Species from Papua, Indonesia. European Journal of Taxonomy. 119:1-6.
DOI: dx.doi.org/10.5852/ejt.2015.119