Showing posts with label Elapidae. Show all posts
Showing posts with label Elapidae. Show all posts

Wednesday, October 16, 2024

[Herpetology • 2024] Ophiophagus hannah, O. bungarus, O. kaalinga & O. salvatana • Taxonomic Revision of the King Cobra Ophiophagus hannah Species Complex (Serpentes: Elapidae), with the Description of Two New Species


Ophiophagus hannah (Cantor, 1836) 
Ophiophagus bungarus 
(Schlegel, 1837) 

in Das, Gowri Shankar, Swamy, Williams, Lalremsanga, Prashanth, Sahoo, ... et Wüster, 2024. 

Abstract
The taxonomy of king cobras (Ophiophagus) was reevaluated using qualitative, mensural and meristic characters, based on 148 entire and five skeletal specimens, and supported by a recent molecular phylogenetic analysis. We provide nomenclatural synopses of both the genus and species-series nomina. We restrict the concept of Ophiophagus hannah s. str. to populations from eastern Pakistan, northern and eastern India, the Andaman Islands, Indo-Burma and Indo-China, south to central Thailand. The nomen Ophiophagus bungarus (Schlegel, 1837) comb. nov. is revived for the populations inhabiting the Sunda Shelf area, including the Malay Peninsula, the Greater Sunda Islands and parts of the southern Philippines. We describe two new species, Ophiophagus kaalinga Gowri Shankar, Das & Ganesh sp. nov. endemic to the Western Ghats of south-western India and Ophiophagus salvatana Gowri Shankar, Das & Wüster sp. nov., inhabiting the island of Luzon in northern Philippines. For the purpose of nomenclatural stability, we designate a neotype for Hamadryas hannah Cantor, 1836. A dichotomous identification key to the four species recognized here is provided.

Keywords: Elapidae, neotype designation, nomenclature, new species, systematics, taxonomy



Ophiophagus hannah (Cantor, 1836) s. str.
Northern king cobra

Ophiophagus bungarus (Schlegel, 1837) comb. nov.
Sunda king cobra

Ophiophagus kaalinga Gowri Shankar, Das & Ganesh sp. nov.
Western Ghats king cobra

Ophiophagus salvatana Gowri Shankar, Das & Wüster sp. nov.
Luzon king cobra

Variation in dorsal body bands in juveniles of the four species of Ophiophagus Günther, 1864 recognised in this study.
A. O. hannah (Cantor, 1836) (photo: H.T. Lalremsanga). B. O. bungarus (Schlegel, 1837) comb. nov. (photo: T. Charlton).
 C. O. kaalinga Gowri Shankar, Das & Ganesh sp. nov. (photo: P. Gowri Shankar). D. O. salvatana Gowri Shankar, Das & Wüster sp. nov. (photo: Bernard Tarun).


Indraneil Das, P. Gowri Shankar, Priyanka Swamy, Rhiannon C. Williams, Hmar Tlawmte Lalremsanga, P. Prashanth, Gunanidhi Sahoo, S.P. Vijayakumar, Jacob Höglund, Kartik Shanker, Sushil K. Dutta, S.R. Ganesh and Wolfgang Wüster. 2024. Taxonomic Revision of the King Cobra Ophiophagus hannah (Cantor, 1836) Species Complex (Reptilia: Serpentes: Elapidae), with the Description of Two New Species. European Journal of Taxonomy. 961(1), 1–51. DOI: doi.org/10.5852/ejt.2024.961.2681

 P. Gowri Shankar, Priyanka Swamy, Rhiannon C. Williams, S. R .Ganesh, Matt Moss, Jacob Höglund, Indraneil Das, Gunanidhi Sahoo, S. P. Vijayakumar, Kartik Shanker, Wolfgang Wüstere, and Sushil K. Dutta. 2021. King or Royal Family? Testing for Species Boundaries in the King Cobra, Ophiophagus hannah (Cantor, 1836), using Morphology and Multilocus DNA Analyses. Molecular Phylogenetics and Evolution. In Press, 107300. DOI: 10.1016/j.ympev.2021.107300 


Tuesday, May 28, 2024

[Herpetology • 2024] Psammodynastidae fam. nov. • Phylogenomics of Psammodynastes and Buhoma (Serpentes: Elapoidea), with the Description of A New Asian Snake Family


Psammodynastes pulverulentus  (Boie, 1827)

Psammodynastidae new family
Das, Greenbaum, Brecko, Pauwels, Ruane, Pirro & Merilä, 2024
photo: Rushen Jaihan

Abstract
Asian mock vipers of the genus Psammodynastes and African forest snakes of the genus Buhoma are two genera belonging to the snake superfamily Elapoidea. The phylogenetic placements of Psammodynastes and Buhoma within Elapoidea has been extremely unstable which has resulted in their uncertain and debated taxonomy. We used ultraconserved elements and traditional nuclear and mitochondrial markers to infer the phylogenetic relationships of these two genera with other elapoids. Psammodynastes, for which a reference genome has been sequenced, were found, with strong branch support, to be a relatively early diverging split within Elapoidea that is sister to a clade consisting of Elapidae, Micrelapidae and Lamprophiidae. Hence, we allocate Psammodynastes to its own family, Psammodynastidae new family. However, the phylogenetic position of Buhoma could not be resolved with a high degree of confidence. Attempts to identify the possible sources of conflict in the rapid radiation of elapoid snakes suggest that both hybridisation/introgression during the rapid diversification, including possible ghost introgression, as well as incomplete lineage sorting likely have had a confounding role. The usual practice of combining mitochondrial loci with nuclear genomic data appears to mislead phylogeny reconstructions in rapid radiation scenarios, especially in the absence of genome scale data.

Psammodynastes pulverulentus.
photo: Rushen Jaihan

Psammodynastidae new family
 
Type genus: Psammodynastes Günther, 1858
Type species: Psammodynastes pulverulentus (Boie, 1827)

Etymology: The generic name is a combination of ancient Greek word psammos (ψάμμος, meaning sand) and dynastes (δυνάστης, meaning ruler). We derive the family name by adding -idae to the stem of the generic suffix.

Contents: Psammodynastes pulverulentus (Boie, 1827), P. pictus Günther, 1858

Distribution: South Asia (North-eastern India, Nepal), southern China, Southeast Asia (Myanmar, Thailand, Malaysia, Indonesian archipelago, Cambodia, Laos, Vietnam, Philippines) and Taiwan.


Sunandan Das, Eli Greenbaum, Jonathan Brecko, Olivier S. G. Pauwels, Sara Ruane, Stacy Pirro and Juha Merilä. 2024. Phylogenomics of Psammodynastes and Buhoma (Elapoidea: Serpentes), with the Description of A New Asian Snake Family. Scientific Reports. 9489. DOI: 10.1038/s41598-024-60215-2
  phys.org/news/2024-05-viper-mimicking-snake-asia-unique.html

Wednesday, January 31, 2024

[Herpetology • 2024] Bungarus sagittatus • A New Species of Krait of the Genus Bungarus (Serpentes: Elapidae) from Ratchaburi Province, western Thailand


Bungarus sagittatus 
Aksornneam, Rujirawan, Yodthong, Sung & Aowphol, 2024

Tenasserim Krait | งูทับสมิงคลาตะนาวศรี || DOI: 10.3897/zse.100.116601

Abstract
We described a new species of elapid snake genus Bungarus from the Tenasserim Mountain Range in Ratchaburi Province, western Thailand. Bungarus sagittatus sp. nov. can be distinguished from all congeners by having the combination of 15 dorsal scale rows; 215–217 ventral scales; 48–56 undivided subcaudal; prefrontal suture 2.4–2.6 times length of internasal suture; anterior chin shields larger than posterior chin shields; head of adult uniform black while juvenile black with small dim white patches on temporal and parietal areas; dorsal body black, with 25–31 white narrow bands, white and black bands at midbody covering 1.5–3.0 and 4.5–6.0 vertebral scales, respectively; dorsal body black bands not intruding ventrals or intruding ventrals less than 0.5 times of width of outer dorsal scales; ventral surface of body immaculate white; ventral side of tail white with a row of dark brown triangular patches on middle pointing posteriorly; tail relatively long, tail length/total length 0.140–0.143. Genetically, the new species has uncorrected pairwise divergences of ≥ 8.29% of the mitochondrial cytochrome b from other Bungarus species. Currently, the new species is only known from the type locality.

Key Words: biodiversity, snake, Southeast Asia, systematics, Tenasserim


Bungarus sagittatus sp. nov.
Paratypes in life showing the variation in different age class.
A. Subadult female (ZMKU R 01088); B. Juvenile (ZMKU R 01090).

Bungarus sagittatus sp. nov.

Diagnosis: Bungarus sagittatus sp. nov. is assigned to the genus Bungarus by its recovered phylogenetic position and having enlarged, hexagonal-shaped, midbody vertebrae scales (Smith 1943; Slowinski 1994). This species can be distinguished from other species of Bungarus by the following combination of characters: 15–15–15 dorsal scale rows; 215–217 ventral scales; 48–56 undivided subcaudal; prefrontal suture 2.4–2.6 times length of internasal suture; anterior chin shields larger than posterior chin shields; head of adult uniform black while juvenile black with small dim white patches on temporal and parietal areas; dorsal surface of body black, with 25–31 white narrow bands, white and black bands at midbody covering 1.5–3.0 and 4.5–6.0 vertebral scales, respectively; dorsal black bands of body not intruding ventrals or intruding ventrals less than 0.5 times of width of outer dorsal scales; ventral surface immaculate white; ventral side of tail white with a row of dark brown triangular patches on middle pointing posteriorly; tail relatively long, tail length/total length = 0.140–0.143.


Etymology: The specific epithet sagittatus is derived from sagittata (L.) meaning arrow and in reference to the dark triangular shape on subcaudals which resembles a barbed arrow.

Distribution: Bungarus sagittatus sp. nov. is currently known from type locality: Khao Krachom, Suan Phueng District, Ratchaburi Province. The area is part of Tenasserim Mountain Range, which lies on Thai-Myanmar borderline.


Akrachai Aksornneam, Attapol Rujirawan, Siriporn Yodthong, Yik-Hei Sung and Anchalee Aowphol. 2024. A New Species of Krait of the Genus Bungarus (Squamata, Elapidae) from Ratchaburi Province, western Thailand. Zoosystematics and Evolution. 100(1): 141-154. DOI: 10.3897/zse.100.116601


Sunday, October 1, 2023

[Herpetology • 2023] Hemachatus nyangensis • Museum DNA reveals A New, potentially extinct Species of Rinkhals (Serpentes: Elapidae: Hemachatus) from the Eastern Highlands of Zimbabwe


Hemachatus nyangensis
Reissig, Major, Renk, Barlow, Paijmans, Morris, Hofreiter, Broadley & Wüster,

in Major, Renk, Reissig, Paijmans, Morris, Hofreiter, Barlow, Broadley et Wüster, 2023.

Abstract
Genetic information plays a pivotal role in species recognition and delimitation, but rare or extinct animals can be difficult to obtain genetic samples from. While natural history wet collections have proven invaluable in the description of novel species, the use of these historical samples in genetic studies has been greatly impeded by DNA degradation, especially because of formalin-fixation prior to preservation. Here, we use recently developed museum genomics approaches to determine the status of an isolated population of the elapid snake genus Hemachatus from Zimbabwe. We used multiple digestion phases followed by single strand sequencing library construction and hybridisation capture to obtain 12S and 16S rDNA sequences from a poorly preserved tissue sample of this population. Phylogenetic and morphological analyses in an integrated taxonomic framework demonstrate that the Zimbabwean rinkhals population represents an old and highly distinct lineage, which we describe as a new species, Hemachatus nyangensis sp. nov. Our phylogenetic dating analysis is compatible with venom spitting having evolved in response to the threat posed by early hominins, although more data are required for a robust test of this hypothesis. This description demonstrates the power of museum genomics in revealing rare or even extinct species: Hemachatus from Zimbabwe are only known from a small area of the Eastern Highlands known for high endemism. No living specimens have been seen since the 1980s, most likely due to dramatic land-use changes in the Eastern Highlands, suggesting that the species could be extinct. In view of its recognition as a highly distinct lineage, urgent action is required to determine whether any populations survive, and to safeguard remaining habitat.

(A and B) Hemachatus nyangensis sp. nov. specimen in life, displaying defensive hooding posture. (C and D) Miombo woodland and grassland habitat of H. nyangensis sp. nov.

Hemachatus nyangensis sp. nov.
Reissig, Major, Renk, Barlow, Paijmans, Morris, Hofreiter, Broadley, and Wüster.

Suggested common name: Nyanga rinkhals.

Diagnosis: Distinguishable from its relative Hemachatus haemachatus, for which we propose the common name “Southern Rinkhals” and which occurs in South Africa, Lesotho, and Eswatini, by its isolated distribution in eastern Zimbabwe. Morphologically, Haemachatus nyangensis sp. nov. generally has overall lower body scale counts than its southern relative: it usually has fewer nape scale rows (16–18 instead of 17–19), midbody scale rows (commonly 17–19 vs usually 19) (Fig 3), fewer subcaudal scales in both females (30–37 vs 35–40 in H. haemachatus) and males (34–38 vs 35–46) and generally fewer ventral scales in both females (126–130 vs 129–148) and males (119–124 vs 117–138) (Table 3). The new species is genetically diagnosable through differences in the 12S and 16S mitochondrial sequence. The description of this species means that the genus Hemachatus is no longer monotypic.

Etymology: The specific epithet nyangensis means “from Nyanga” in Latin and is chosen to reflect the distribution of the species in the Nyanga district of Zimbabwe, the only area in which it has been documented. 


Tom Major, Pia Renk, Jens Reissig, Johanna L. A. Paijmans, Ellie Morris, Michael Hofreiter, Axel Barlow, Donald G. Broadley and Wolfgang Wüster. 2023. Museum DNA reveals A New, potentially extinct Species of Rinkhals (Serpentes: Elapidae: Hemachatus) from the Eastern Highlands of Zimbabwe. PLoS ONE. 18(9): e0291432. DOI: 10.1371/journal.pone.0291432


Monday, July 3, 2023

[Herpetology • 2023] Demansia cyanochasmaWhip it into Shape: Revision of the Demansia psammophis (Schlegel, 1837) Complex (Squamata: Elapidae), with A Description of A New Species from central Australia


Demansia cyanochasma 
Nankivell, Maryan, Bush & Hutchinson, 2023

 
Abstract
The genus Demansia Günther is the most diverse genus of Australian terrestrial elapids. A phylogenetic framework for the familiar but problematic taxa D. psammophis and D. reticulata (Gray) has been long overdue to ascertain interspecific relationships and resolve unclear taxonomic issues. Here we present an integrated molecular phylogenetic and morphological analyses to review species delineation, resulting in confirmation that both D. psammophis and D. reticulata are full species and that some populations referred to D. r. cupreiceps Storr are not distinguishable from more typical D. reticulata. We also find the widespread central Australian population (treated by most authors as part of cupreiceps) to be specifically distinct. We redescribe D. psammophis and D. reticulata to clarify morphological and geographical boundaries and describe Demansia cyanochasma sp. nov. based on a combination of molecular genetic markers, details of colour and pattern, adult total length and a few morphometric attributes. We also designate a lectotype for D. psammophis from the original syntype series and comment on the necessity for further taxonomic refinement of this distinctive group.

Keywords: Reptilia, Demansia cyanochasma, morphology, mtDNA, nDNA, phylogeny, synonymy, taxonomy, whip snakes





James H. Nankivell, Brad Maryan, Brian G. Bush and Mark N. Hutchinson. 2023. Whip it into Shape: Revision of the Demansia psammophis (Schlegel, 1837) Complex (Squamata: Elapidae), with A Description of A New Species from central Australia. Zootaxa. 5311(3); 301-339. DOI: 10.11646/zootaxa.5311.3.1


Monday, February 6, 2023

[Herpetology • 2023] Molecular Phylogeny reveals Distinct Evolutionary Lineages of the Banded Krait, Bungarus fasciatus (Squamata: Elapidae) in Asia


Bungarus fasciatus sensu stricto from Mizoram, India

in Biakzuala, Lalremsanga, Santra, Dhara, ... et Malhotra, 2023.   

Abstract
The banded krait, Bungarus fasciatus is a widespread elapid snake, likely to comprise several distinct species in different geographic regions of Asia. Therefore, based on molecular phylogenetics and comparative morphology data, we present an overview of the systematic composition of the species to delimit potential biogeographic boundaries. Our phylogenetic analyses, based on four mitochondrial genes, reveal the existence of at least three evolutionary lineages within B. fasciatus, corresponding to Indo-Myanmar, Sundaic and eastern Asian lineages. We are convinced that there are at least three taxonomic entities within the nomen B. fasciatus and restrict the distribution of B. fasciatus sensu stricto to the Indo-Myanmar region. We also provide additional natural history data of the taxon from eastern India. Finally, we advocate further studies to establish the degree of reproductive isolation among these diverging evolutionary lineages and to reassess the systematic status of this species complex especially the Sundaic and eastern Asian lineages.
 
Map showing the distribution range of Bungarus fasciatus sensu lato, based on the latest species map provided by the World Health Organization (2022); the coloration corresponds to the three distinct evolutionary lineages recovered in the phylogenetic analyses. The type locality of Bungarus fasciatus sensu stricto is indicated by a black star. Localities of specimens used in the morphological analyses are indicated by black filled diamonds (WB), circles (MZ), and triangles (JV).
Abbreviations for countries are: IN India, NP Nepal, BT Bhutan, BD Bangladesh, LK Sri Lanka, CN China, MM Myanmar, LA Laos, TH Thailand, VN Vietnam, KH Cambodia, MY Malaysia, BN Brunei Darussalam, ID Indonesia (KA Kalimantan, SM Sumatra, JW Java).


Live individuals of Bungarus fasciatus sensu stricto (a) from Keitum village, Mizoram, India (MZMU1421), and (b) a juvenile with creamish dorsum coloration from Saikhawthlir village, Mizoram, India.

Bungarus fasciatus from Hooghly, West Bengal.


Lal Biakzuala, Hmar T. Lalremsanga, Vishal Santra, Arindam Dhara, Molla T. Ahmed, Ziniya B. Mallick, Sourish Kuttalam, A. A. Thasun Amarasinghe and Anita Malhotra. 2023.  Molecular Phylogeny reveals Distinct Evolutionary Lineages of the Banded Krait, Bungarus fasciatus (Squamata, Elapidae) in Asia. Scientific Reports. 13: 2061. DOI: 10.1038/s41598-023-28241-8

Saturday, December 17, 2022

[Herpetology • 2022] Naja fuxi • A New Cobra (Naja Laurenti, 1768; Serpentes: Elapidae) from China with Designation of A Neotype for Naja atra


Naja fuxi Shi, Vogel, Chen & Ding, 

in Shi, Vogel, Ding, Rao, Liu, Zhang, Wu & Chen, 2022. 
Brown Banded Cobra | 西南眼镜蛇  || งูเห่าภูเขา | DOI: 10.3390/ani12243481

Abstract
Taxonomic frameworks for medically important species such as cobras (genus Naja Laurenti, 1768; Squamata, Elapidae) are essential for the medical treatment of snake bites and accurate antivenin development. In this paper, we described the former N. kaouthia populations recorded from China as a new species and designated a neotype for N. atra-based morphological and mitochondrial phylogenetic analysis. The new species Naja fuxi sp. nov. was morphologically diagnosed from N. kaouthia by (1) regular single narrow crossband present on the middle and posterior parts of the dorsum (3–15, 7.9 ± 2.7, n = 32) and the dorsal surface of the tail (1–6, 4.2 ± 1.1, n = 32) of both adults and juveniles, buff-colored with dark fringes on both edges, vs. South Asian populations (n = 39) and Southeast Asian populations (n = 35) without cross bands, with irregular cross bands or multiple light-colored crossbands pairs, or densely woven lines; (2) small scales between the posterior chin shields, usually three (40%) or two (37%), rarely four (13%), or one (10%) (n = 30) vs. mostly one (81%) and rarely two (19%) (n = 28); (3) ventrals 179–205 (195.4 ± 6.7, n = 33) vs. South Asian populations 179–199 (188.7 ± 5.9, n = 12); Southeast Asian populations 168–186 (177.8 ± 4.9, n = 18). Phylogenetically, the new species forms an independent sister clade to the clade including N. atra, N. kaouthia, N. oxiana and N. sagittifera. Furthermore, the subspecies N. naja polyocellata should be resurrected and recognized as a full species, N. polyocellata comb. nov., and the subspecies N. sumatrana miolepis should be resurrected.

Keywords: Asian cobras; Naja kaouthia; Naja atra; taxonomy

Southeastern Asian Naja kaouthia in life.
(A,B) a juvenile from Selangor, Peninsular Malaysia; (C) an adult from Chang Wat Nakhon Ratchasima, Thailand; (D) a juvenile from Samut Prakan, Thailand; (E) an adult from Surat Thani, Thailand; (F) an adult from Ranong, Thailand; (G,H) two adults from Duc Trong, Lam Dong, Vietnam.
(A) was photographed by Dr. Teo Eng Wah. Other photos were cited from iNaturalist.org occurrence dataset doi.org/10.15468/ab3s5x via GBIF.org (licensed under http://creativecommons.org/licenses/by-nc/4.0/) by following photographer: Gregory Greene ((C) record No. 2006052432), Wich’yanan L ((D) record No. 3090707753), Mintkhaosok ((E) record No. 3325726349), Knotsnake ((F) record No. 3384192379), Herpingvietnam ((G) record No. 2557801804), Leonid A. Neymark ((H) record No. 2366151765).

Naja atra in life.
(A) Adult from Qingtian, Zhejiang, China; (B–D) one adult (B,C) and another (D) from Lishui, Zhejiang, China; (E) juvenile from Wuyi, Fujian, China; (F,G) one adult from Guangzhou, Guangdong, China; (H) adult from Guangzhou, Guangdong, China.
(A–E) Photographed by Bin-Qing Zhu; (F–H) photographed by Liang Zhang.

 Naja fuxi sp. nov. in life and habitats.
(A, B) Dorsolateral view and hood pattern of adult female paratype CIB DL2018081005 from Panzhihua, Sichuan, China; (C, D) Dorsolateral and front view of an unvouchered adult from Jiangcheng, Pu’er, Yunnan, China; (E, F), two adults from Wenshan, Yunnan, China; (G) Subtropical Forest at type locality Panzhihua, Sichuan, China; (H) Tropical monsoon forest and farmland at Jiangcheng, Pu’er, Yunnan, China.
(Photos (A, B, H) by Sheng-Chao Shi; (C, D, G) by Li Ding; (E, F) by Liang Zhang).


Naja fuxi sp. nov. Shi, Vogel, Chen, Ding

Diagnoses. (1) body scales smooth, scale rows at anterior body 19–29 (23.8 ± 3.1, n = 32), mid-body 19–27 (20.9 ± 1.5, n = 33), posterior body 12–19 (15.3 ± 2.9, n = 33); (2) ventrals 179–205 (195.4 ± 6.7, n = 33), subcaudals 45–61 (51.4 ± 9.7, n = 33); (3) total length in adults 690–1366 mm (1039.5 ± 207.6 mm, n = 15), tail length 110–201 mm (145.9 ± 27.8 mm, n = 15), tail length/total length 0.128–0.162 (0.141 ± 0.009, n = 32, including adults and juveniles); (4) small scales between posterior chin shields mostly three (40%) or two (37%), rarely four (13%) or one (10%) (n = 30); (5) dorsum light brown in adults, deep brown or black in juveniles (n = 32); (6) throat pale usually without dark mottling, ventrolateral throat spots distinct, followed by a broad light brown band; (7) hood markings usually a pale oval marking with narrow dark inner and outer border (73%), sometimes irregular residual patterns of a monocle (20%), rarely indistinguishable (7%), no dark side spots in any individual (n = 30); (8) both adults and juveniles with clear regular single narrow buff cross bands with dark fringes on middle, posterior dorsum 3–15 (7.9 ± 2.7, n = 32) and dorsal tail 1–6 (4.2 ± 1.1, n = 32); (9) hemipenial spines on distal part well connected at base, forming calyculate fold; (10) fangs not modified for spitting, venom discharge orifice relatively large.

Etymology. The new species is named after Fuxi (伏羲), one of the human ancestors in Chinese mythologies, usually depicted in cultural relics as half-man and half-snake. The common postures of Fuxi resembles a cobra in reared status; this species is named for the impact that snake had in human culture. The specific nomen is a noun in apposition. To identify this species quickly when dealing with snakebites, we suggest “Brown Banded Cobra” as a common English name, for its unique coloration with a brown body and light crossbands on the body and tail. For the Chinese name, we suggest “西南眼镜蛇” (Xī Nán Yǎn Jìng Shé) as it is distributed in the southwestern part of China.

Distribution and ecology. The Brown Banded Cobra is currently known from tropical and southern subtropical areas of southwestern China at elevations between 1000–1400 m. Specimens examined in this study are recorded from Renhe District and Miyi County, Panzhihua Prefecture, southwestern Sichuan Province, and Jiangcheng County, Simao District, Menglian County, Ximeng County, and Pingbian County, Yunan Province. This species was also reported from western Guangxi [30,31,32]. This species is expected to be found in adjacent areas including western Guangxi Zhuang Autonomous Region and southwestern Guizhou Province of China, northeastern Myanmar, northern Laos, northern Thailand, and northwestern Vietnam.
....

 Conclusions: 
Our results led to taxonomic revisions of some Asian cobras: (1) the former Chinese population of N. kaouthia represents a new species, N. fuxi sp. nov.; (2) the subspecies N. naja polyocellata was resurrected and recognized as a full species N. polyocellata comb. nov.; (3) the subspecies N. sumatrana miolepis was resurrected. This study highlights the necessity to evaluate effectiveness of cobra antivenin based on comprehensive taxonomic frameworks. However, there are still some open questions about the systematics of widespread species such as N. kaouthia. The taxonomy of Asian cobras still needs further revision. A wide international collaboration network is recommended to construct a solid taxonomic framework of these medically important species for the common well-being of Asian people.


Sheng-Chao Shi, Gernot Vogel, Li Ding, Ding-Qi Rao, Shuo Liu, Liang Zhang, Zheng-Jun Wu and Ze-Ning Chen. 2022. Description of A New Cobra (Naja Laurenti, 1768; Squamata, Elapidae) from China with Designation of A Neotype for Naja atraAnimals. 12(24); 3481. DOI: 10.3390/ani12243481 
 
Simple Summary: Cobras (Naja Laurenti, 1768) are a group of well-known highly venomous snakes, which cause numerous cases of snakebites every year, especially in South Asia and Southern China. Taxonomic framework is essential for the medical treatment of snake bites and accurate antivenin development. However, the taxonomy of Asian cobras is still puzzling, especially for the widespread species Monocled Cobra (N. kaouthia Lesson, 1831). This study provided new materials and understanding for the taxonomy of this species by combining mitochondrial phylogenetic analysis and morphological comparisons based on samples from a vast area in Asia. The results showed that the Chinese population of N. kaouthia represents a new species. This study also provided new data for N. atra and designated a neotype for it. Furthermore, the subspecies N. naja polyocellata was resurrected and recognized as a full species, N. polyocellata comb. nov., and the subspecies N. sumatrana miolepis was also resurrected. This study highlighted the necessity to evaluate the effectiveness of cobra antivenin based on a comprehensive taxonomic framework.

Tuesday, November 15, 2022

[Herpetology • 2022] Toxicocalamus vertebralis, T. spilorhynchus & T. atratusHidden Diversity in Semi-fossorial Melanesian Forest Snakes: A Revision of the Toxicocalamus loriae Complex (Squamata: Elapidae) from New Guinea


 A, B Toxicocalamus vertebralis sp. nov. from Kol, Jimi Valley, Jiwaka Province, PNG.
C, D T. spilorhynchus sp. nov. from Garaina, Morobe Province, PNG.
E, F T. atratus sp. nov. from Kundiawa, Wahgi Valley, Chimbu Province, PNG.
  
  Kraus, Kaiser & O’Shea, 2022.
Photographs by Fred Parker.

Abstract
With its conservative set of scalation characters, Toxicocalamus loriae is a morphologically confusing species to which a wide array of phenotypes has been assigned. Careful analysis of 224 museum specimens reveals that multiple distinct species remain hidden under the name T. loriae and that diagnostic, species-level differences are more nuanced in this group of snakes than among other members of the genus. Our taxonomic reassessment leads us to resurrect the species T. lamingtoni comb. nov., T. loennbergii comb. nov., and T. nymani comb. nov. from synonymy with T. loriae, retain only T. pratti as a synonym, and describe three new species. As a consequence, T. loriae is no longer recognized as ranging throughout the entire island of New Guinea but is instead restricted to the southern versant of the Papuan Peninsula, and T. lamingtoni and T. spilorhynchus sp. nov. are species restricted to that same peninsula’s northern versant. Toxicocalamus loennbergii is known only from the type series taken on the Onin Peninsula in West Papua, Indonesia, Toxicocalamus atratus sp. nov. is a high-elevation (800–2200 m) Central Highlands endemic, and T. vertebralis sp. nov. ranges from the Central Highlands of Papua New Guinea eastward into the Wau area of Morobe Province. Toxicocalamus nymani inhabits a geologically more heterogenous region, occurring from the Central Highlands eastward to the Huon Peninsula, including Karkar Island, and adjacent areas of Madang Province as well as the northernmost reaches of the Papuan Peninsula. We expect that denser geographic sampling across New Guinea and focussed specimen collection of a few known populations will result in the recognition of additional species in this complex.

Keywords: Biogeography, Hydrophiinae, morphology, new species, New Guinea, snake, taxonomy


Toxicocalamus loriae (Boulenger, 1898)

Diagnosis: A modestly sized member of the T. loriae Group (maximum SVL in males 490 mm, in females 440 mm) with the following unique combination of characters: two scales covering vent; three infralabials contacting anterior genial; posterior genials separated by two intergenials, one in front of the other; intergenials widest anteriorly. Elongate preocular, at least twice as long as wide, contacting nasal but not internasal; one (in 58% of specimens) or two (42%) postoculars; two (55%) or three (45%) posterior temporals; ventral scale count not sexually dimorphic, 162–197 ventrals in 15 males, 172–190 in four females; subcaudal scale count sexually dimorphic without overlap, 40–50 in males, 28–33 in females; SCR 17.1–21.5% in males, 12.5–16.1% in females; pale markings on prefrontals absent (67%), small or vaguely developed (28%), or present (5%), not obviously correlated with body size; tail spine white, paler than the rest of the tail; venter uniformly yellow, yellow with a mid-ventral row of brown spots on each ventral, with a few brown spots scattered down the venter, or with each spot expanded into a brown bar across the anterior of each ventral.

Etymology: Named by Boulenger (1898) for the collector of the holotype. The description was published in English.


Toxicocalamus nymani (Lönnberg, 1900), comb. nov.

Diagnosis: A modestly sized member of the T. loriae Group (maximum SVL in males 422 mm, in females 540 mm) with the following unique combination of characters: two scales covering vent; three infralabials contacting anterior genial; posterior genials entirely separated (45%) by a single intergenial or in anterior (53%) or entire (2%) contact with each other; intergenial usually widest posteriorly or centrally. Preocular approximately as long as wide and never twice as long as wide, usually contacting nasal (94%), not contacting internasal; one (4%) or two (96%) postoculars; one (1%), two (69%), three (27%), four (1%), or five (1%) posterior temporals; 178–198 ventrals in 18 males, 191–210 in 22 females, sexually dimorphic with overlap (t37 = 4.9581, p < 0.00001); 39–48 subcaudals in males, 26–37 in females, sexually dimorphic without overlap; SCR 17.5–20.7% in males, 11.6–15.8% in females, sexually dimorphic without overlap; yellow nuchal collar and yellow markings on prefrontals absent (48%), small or vaguely developed (7%), or present (45%); tail spine paler than remainder of tail; venter uniformly dark brown or dark brown with the posterior of each ventral paler brown or yellowish brown, giving a banded appearance (reported as “blackish brown, edged with light grey” within one year of preservation; Lönnberg 1900).

Etymology: The species was named for Erik Nyman, the collector of the type series. It also serves as a tribute to a remarkable scientist, who died in 1900 on the journey home to Europe. The description was published in ­English.


Toxicocalamus loennbergii (Boulenger, 1908), comb. nov.

Diagnosis: A modestly sized member of the T. loriae Group (maximum SVL 565 mm, only females known) with the following unique combination of characters: two scales covering vent; four infralabials contacting anterior genial; a single intergenial separating posterior genials, widest posteriorly. Preocular elongate, approximately twice as long as wide, contacting nasal (62%) or not (38%), not contacting internasal; relatively short snout (SNL/SNW x̄ = 0.95, range = 0.93–0.99); relatively small eye (EY/SNL x̄ = 0.16, range = 0.15–0.18); one postocular (fused to supraocular on one side of one specimen); three posterior temporals; 214–220 ventrals in four females; 23–32 subcaudals; SCR 9.7–12.7%; dark vertebral stripe; large pale blotch on parietal; pale markings on prefrontals absent (50%), small or vaguely developed (25%), or well developed (25%), best developed in the smallest specimen; tail spine white, paler than remainder of tail; and venter uniformly yellow.

Etymology: Named by Boulenger (1908) for Professor Einar Lönnberg (1865–1942), the Swedish zoologist who described Pseudapistocalamus nymani. The description was published in English.



Toxicocalamus lamingtoni (Kinghorn, 1928), comb. nov.

Diagnosis: A modestly sized member of the T. loriae Group (male SVL up to 428 mm, female SVL up to 500 mm), with the following unique combination of characters: cloacal plate single; a single intergenial separating posterior genials, widest posteriorly. Preocular elongate, approximately twice as long as high, contacting nasal but not internasal; one postocular; two (92%) or three (8%) posterior temporals; 160–178 ventrals in nine males, 186–195 in nine females, sexually dimorphic without overlap; 41–53 subcaudals in males, 26–34 in females, sexually dimorphic without overlap; SCR 19.3–23.0% in males, 12.2–14.9% in females, sexually dimorphic without overlap; females with very short tails relative to males (TLR sexually dimorphic without overlap, 16.7–20.8% in adult males, 9.0–11.6% in adult females); pale markings on prefrontals absent, even in juveniles; tail spine brown, same colour as remainder of tail; venter uniformly yellow; juveniles with brown anterior supralabials; and head pattern in juveniles typically consisting of a complete, broad, pale band across the nape, parietals, temporals, and last two supralabials, with remainder of head anterior to that lacking pale markings.

Etymology: Kinghorn (1928: 291) stated that the specimens on which his description was based were all collected in “Mount Lamington district, Northern Division, Papua.” It is possible that the author chose the name of the district, which itself takes its name from Mt. Lamington (8.94°S, 148.16°E, elevation 1680 m), a stratovolcano in Oro Province, Papua New Guinea, as the name for the new species. However, this would ordinarily be indicated by the adjectival suffix -ensis, which Kinghorn did not use. He may have been unaware of proper Latinized name formation, as he incorrectly named other species for localities using the genitive case (-i or -ae). Regardless, the person after whom these localities were named is Lord Lamington, Charles Wallace Alexander Napier Cochrane-Baillie (1860–1940), was the 2nd Baron Lamington and a British colonial administrator, who served as the 8th Governor of Queensland (1896–1901) and the 14th Governor of Bombay (1903–1907). The description was published in English.


Toxicocalamus loriae Group species in live and perimortem photographs to show colour in life.
 A, B Toxicocalamus vertebralis sp. nov. (CAS 140042) from Kol, Jimi Valley, Jiwaka Province, PNG.
C, D T. spilorhynchus sp. nov. (MCZ R-152431) from Garaina, Morobe Province, PNG.
T. atratus sp. nov. (MCZ R-84026) from Kundiawa, Wahgi Valley, Chimbu Province, PNG. F T. atratus (MCZ R-111767) from Kundiawa, Wahgi Valley, Chimbu Province, PNG.
Photographs by Fred Parker.

Toxicocalamus vertebralis sp. nov. 
 
Etymology: The species epithet is a Latin masculine adjective in recognition of the vertebral stripe that distinguishes this species from most other Toxicocalamus.

Diagnosis: A large member of the T. loriae Group (known male SVL up to 565 mm, known female SVL up to 685 mm) with the following unique combination of characters: body length sexually dimorphic (t10 = 2.3826, p = 0.0192); two scales covering vent; three infralabials contacting first genial; a single intergenial between posterior genials, widest posteriorly; preocular contacting nasal (81%) or not (19%), not contacting internasal; relatively long snout (SNL/SNW mean = 1.07, range = 0.95–1.18); relatively large eye (EY/SNL mean = 0.21, range = 0.16–0.28); two postoculars; usually three (74%) posterior temporals; ventral scale count sexually dimorphic with overlap (t17 = 4.7511, p < 0.0001), 194–210 in nine males, 203–232 in nine females and a female embryo; subcaudals 39–52 in males, 31–38 in females, sexually dimorphic without overlap; SCR sexually dimorphic without overlap, 16.7–20.5% in males, 12.8–14.8% in females; adult females with much shorter tails than adult males, TLR 13.3–17.1% in adult males, 6.5–10.7% in adult females; pale parietal blotch absent; pale markings on prefrontals absent (95%) or vague (5%); tail spine white, paler than remainder of tail; and venter uniformly yellow.


Toxicocalamus spilorhynchus sp. nov.
  
Etymology: The species epithet is a Latinized masculine adjective formed by combining the Greek σπίλος (spilos, meaning spot) and ῥῠ́γχος (rhynchos, meaning snout), in recognition of the distinctive prefrontal blotch that typifies the species.

Diagnosis: A moderately sized member of the T. loriae Group (SVL up to 600 mm) with the following unique combination of characters: two scales covering vent; three infralabials contacting first genial; a single intergenial between posterior genials, widest posteriorly; preocular contacting nasal (87%) or not (13%), not contacting internasal (93.3%); relatively long snout (SNL/SNW mean = 1.16, range = 0.99–1.40); relatively large eye (EY/SNL mean = 0.22, range = 0.17–0.24); two postoculars (93%); usually three (67%) posterior temporals; ventral scale count sexually dimorphic with overlap (t12 = 3.7381, p = 0.001416), 172–184 ventrals in eight males, 178–197 in six females; subcaudals sexually dimorphic without overlap, 43–57 in males, 20–29 in females; SCR strongly sexually dimorphic, with the relative contribution of subcaudal scale number in males twice what it is in females (20.0–24.0 in males, 10.0–13.1 in females); pale parietal blotch usually absent (present in four small specimens); pale markings on prefrontals present; and venter uniformly yellow.

Uncollected juvenile Toxicocalamus atratus sp. nov. from Kutubu area, 1760 m elevation, Southern Highlands Province, PNG, to show the colouration in life.
Photographs by Nick Baker.

Toxicocalamus atratus sp. nov. 

Etymology: The species epithet is a masculine Latin adjective meaning “dressed in black,” in recognition of the dark dorsal and ventral colouration of adults of this species.

Diagnosis: A large member of the T. loriae Group (male SVL up to 655 mm, female SVL up to 682 mm) with the following unique combination of characters: sexual size dimorphism in SVL present (t71 = 2.5689, p = 0.0062); two scales covering vent; posterior genials usually entirely separated (80%) but may be in anterior contact (20%) with each other; intergenial usually widest posteriorly (89%) or centrally (11%); preocular usually contacting nasal (77%), not contacting internasal; preocular rather short, less than twice as long as deep; postoculars two (one in 26%); posterior temporals two (58%) or three (42%); ventrals sexually dimorphic (t85 = 7.400, p < 0.00001), 177–206 in males, 187–218 in females; subcaudals sexually dimorphic with overlap (t87 = –24.8814, p < 0.00001), 40–47 in males, 26–41 in females; two scales covering vent; yellow nuchal collar and yellow markings on prefrontals present in juveniles, usually absent (but sometimes merely faded) in adults; tail spine paler than remainder of tail; and venter uniformly dark brown or dark brown with the posterior of each ventral paler brown or yellowish brown in adults, giving a banded appearance, black in life; venter yellow with a black spot on lateral margins of each ventral in juveniles.


Fred Kraus, Hinrich Kaiser and Mark O’Shea. 2022. Hidden Diversity in Semi-fossorial Melanesian Forest Snakes: A Revision of the Toxicocalamus loriae Complex (Squamata, Elapidae) from New Guinea. Vertebrate Zoology. 72: 997-1034.  DOI: 10.3897/vz.72.e89647

Saturday, October 8, 2022

[Herpetology • 2022] Toxicocalamus longhagen • A New Species of New Guinea Worm-Eating Snake Genus Toxicocalamus Boulenger, 1896 (Serpentes: Elapidae) from Western Highlands Province, Papua New Guinea


Toxicocalamus longhagen
 Roberts, Iova & C. Austin, 2022


Abstract
We describe a new species of New Guinea Worm-Eating Snake (Elapidae: Toxicocalamus) from a specimen in the reptile collection of the Papua New Guinea National Museum and Art Gallery. Toxicocalamus longhagen sp. nov. can be easily distinguished from other species of this genus by the presence of paired subcaudals, a preocular scale unfused from the prefrontal scale, a prefrontal distinct from the internasal scale that contacts the supralabials, a single large posterior temporal and two postocular scales. The new taxon is currently known only from one specimen, which was collected from Mt. Hagen Town in Western Highlands Province, Papua New Guinea in 1967. The new species was originally identified as T. loriae, but the unique head scalation and postfrontal bone morphology revealed through micro-computed tomography scanning easily distinguish the new species from T. loriae sensu stricto. This is the first species of this genus described from Western Highlands Province.

Key Words: Australasia, fossorial, Melanesia, micro-computed tomography, morphology

Photographs of A. Dorsal B. Ventral views of the holotype of Toxicocalamus longhagen (PNGM 22160).
 Metallic rectangles in image B are specimen probes used to pin specimen down for ventral scale visualization.
Scale bar indicates 5 cm.

Photograph, line illustrations, and 3D µCT renderings of the right (A–C) and dorsal (E–F) views of the holotype of Toxicocalamus longhagen (PNGM 22160).
 Scale bars: 5 mm.

Toxicocalamus longhagen sp. nov.
 
Diagnosis: 
A medium-sized species with moderate habitus (566.0 total length, 12.8 maximum lateral width) with 15-15-15 dorsal scale rows, 200 ventral scales, 43 paired subcaudals, preocular present and not fused to prefrontal, preocular not in contact with internasal or nasal; prefrontal separating preocular from internasal and nasal by contacting second supralabial; frontal not fused with supraoculars; internasals not fused; four circumoculars – one supraocular, one preocular, two postoculars; nasals divided; one anterior temporal not fused with supralabials, one posterior temporal; six supralabials, the second in contact with prefrontal, preventing contact between nasal and preocular; cloacal plate divided; ventrals yellowish with light to dark brown.
...

Etymology: The specific epithet, longhagen, is a combination of “long” – a Tok Pisin word meaning ‘from’ and “hagen” that refers to the type locality of Mt. Hagen Town (Fig. 1). Tok Pisin is a uniting and official language of Papua New Guinea, the most linguistically complex region on the planet with more than 800 unique languages (Foley 2010).

 
 Jackson R. Roberts, Bulisa Iova and Christopher C. Austin. 2022. A New Species of New Guinea Worm-Eating Snake (Serpentes, Elapidae, Toxicocalamus Boulenger, 1896) from Western Highlands Province, Papua New Guinea. Zoosystematics and Evolution. 98(2): 399-409. DOI: 10.3897/zse.98.90520

Abstract in Tok Pisin: Mipela tokaut lon nupela kain sinek I save kaikai ol liklik sinek insait lon graun lon New Guinea (Elapidae: Toxicocalamus) blo wanpela sinek I bin stap lon ol sinek koleksen insait lon Papua New Guinea National Museum and Art Gallery. Toxicocalamus longhagen sp. nov. em u ken lukim isi tru lon ol arapela wankain poro blo em lo ol wantok blo em we u ken lukim tupela aninit lo tel, na polhet blo eye girere or sikin stap em yet lon polhet na nus girere wantem lo antap wisket, na tupela girere stap baksait lo ai blo em. Dispela nupla kain sinek em nau yet ol kisim save lon wanpla sinek ol kisim lon Mt. Hagen Taun lon Western Highlands Province, Papua New Guinea lon 1967. Dispela nupela kain sinek em pastem tru ol givim nem olsem T. loriae tasol em gat wanpela spesol kain girere lo polhet blo em I tok aut lon liklik masin/computa I galasim isi namel lon nupela sinek na T. loriae sensu stricto. Dispela em nambawan kain sinek ol kisim save lo wantok blo em na tok klia olsem em kam lo Western Highlands Province.