Showing posts with label BMC Evolutionary Biology. Show all posts
Showing posts with label BMC Evolutionary Biology. Show all posts

Friday, January 9, 2026

[Herpetology • 2025] Spinomantis lakolosy & S. lavabato • Two New Species of the Spinomantis bertini species complex (Anura: Mantellidae) from south-eastern Madagascar

 

Spinomantis lakolosy
Spinomantis lavabato

Hutter, Andriampenomanana, Lambert & Vences, 2025  

Abstract
We scientifically name and describe two new species of spiny frog (Mantellidae: Spinomantis) from moderately high elevations in Ranomafana National Park, in south-east Madagascar. This region has been surveyed extensively and has a remarkably high anuran diversity with many undocumented species still being regularly discovered. We describe a previously identified candidate species, S. sp. Ca07, as Spinomantis lavabato sp. nov. and a previously undiscovered species from this region as Spinomantis lakolosy sp. nov.. The new species are morphologically cryptic within the S. bertini complex but can be recognized by a combination of subtle differences in coloration such as a lack or weak expression of sharp dorsolateral color border in both species. Bioacoustically, the new species are quite different from other species in the complex: Spinomantis lakolosy sp. nov. has the longest note duration with a powerful-sounding call that rings like a bell, which can be heard over the sound of rushing water in nearby streams; while S. lavabato sp. nov. differs by having the shortest note duration that is quiet and sounds like a trill. Furthermore, both species are substantially diverged in mitochondrial DNA, with pairwise distances in a fragment of the 16S rRNA marker of 7–9% to all other related species. Furthermore, we identify a lineage for future study in the complex from the nearby high-elevation site Andemaka within Ranomafana National Park that has an intermediate sounding advertisement call between the newly described species; although we cannot formally describe this lineage herein due to unavailability of voucher specimens, this lineage emphasizes the unexpectedly high diversity of sympatric species of the S. bertini complex in the Ranomafana area. Additionally, we identify another lineage from Ambahavala in the Anosy Chain with strong mitochondrial divergence for future study. Our findings also highlight the need for continued inventory work in high elevation rainforests of Madagascar, even in relatively well-studied regions such as Ranomafana National Park.

Key Words: Amphibia, Anura, new species, Ranomafana National Park, Spinomantis lakolosy, Spinomantis lavabato, taxonomy

Ex-situ dorsal-lateral, dorsal, and ventral photographs of (A) female Spinomantis lakolosy (paratype: KU340867, CRH 751; ventral side CRH 678) and (B) male specimen KU340884 (CRH 781) from the divergent population here provisionally assigned to S. lakolosy.

In-situ photographs of the habitat and microhabitat of Spinomantis lakolosy.
 The panels show: (A) the outskirts of the village of Miranony (blue circle) that leads to the primary forest habitat in the top right of the photograph (purple arrow); (B) within the primary forest habitat, the fast-flowing stream where S. lakolosy calls at night; (C) male paratype KU340868 (CRH 752) perched on a rock ledge alongside the stream; and (D) female paratype KU340867 (CRH 751) perched on a small branch alongside a rock ledge.

Spinomantis lakolosy sp. nov.

Spinomantis lavabato
Ex-situ dorsal-lateral, dorsal, and ventral photographs of (A) male (holotype: KU336975, JJW 2336) and (B) female (paratype: KU336978, CRH 118) in life.

Spinomantis lavabato sp. nov.  

 
 Carl R. Hutter, Zo F. Andriampenomanana, Shea M. Lambert and Miguel Vences. 2025. Two New Species of the Spinomantis bertini species complex (Mantellidae) from south-eastern Madagascar. Evolutionary Systematics. 9(2): 285-299. DOI: doi.org/10.3897/evolsyst.9.174833 [29 Dec 2025]

Tuesday, June 26, 2018

[PaleoOrnithology • 2018] A North American Stem Turaco, and the Complex Biogeographic History of Modern Birds



Field & Hsiang, 2018.

bird images by International Touraco Society

Abstract
Background: 
Earth’s lower latitudes boast the majority of extant avian species-level and higher-order diversity, with many deeply diverging clades restricted to vestiges of Gondwana. However, palaeontological analyses reveal that many avian crown clades with restricted extant distributions had stem group relatives in very different parts of the world.

Results:
Our phylogenetic analyses support the enigmatic fossil bird Foro panarium Olson 1992 from the early Eocene (Wasatchian) of Wyoming as a stem turaco (Neornithes: Pan-Musophagidae), a clade that is presently endemic to sub-Saharan Africa. Our analyses offer the first well-supported evidence for a stem musophagid (and therefore a useful fossil calibration for avian molecular divergence analyses), and reveal surprising new information on the early morphology and biogeography of this clade. Total-clade Musophagidae is identified as a potential participant in dispersal via the recently proposed ‘North American Gateway’ during the Palaeogene, and new biogeographic analyses illustrate the importance of the fossil record in revealing the complex historical biogeography of crown birds across geological timescales.

Conclusions: 
In the Palaeogene, total-clade Musophagidae was distributed well outside the range of crown Musophagidae in the present day. This observation is consistent with similar biogeographic observations for numerous other modern bird clades, illustrating shortcomings of historical biogeographic analyses that do not incorporate information from the avian fossil record.

Keywords: Biogeography, Palaeontology, Turaco, Musophagidae, Phylogeny, Fossils, Gondwana, Dispersal, Otidimorphae, Macroevolution


Fig. 1 Skeletal morphology of total clade musophagids.
(a) Complete skeleton of Foro panarium holotype USNM 336261. Scale bar equals 10 cm.
(b) 3-dimensional CT rendering of the pectoral region of Ross’s Turaco (Musophaga rossae) GCO 1142 (Georgia College Ornithology, Georgia College and State University, Milledgeville, GA). LF – left ramus of furcula, RC – right coracoid, RF – right ramus of furcula, S – sternum. 153:1 denotes unfused midline of furcula, which optimizes as an unambiguous synapomorphy of a Foro + Musophagidae clade. (c) Pectoral region of F. panarium. LH – left humerus, RS – right scapula. (d) Cranial region of USNM 336261. 50:1 processus costales of axis absent. 152:1 bill short and stout with broad processus maxillaris of the os nasale. (e) Distal end of right leg of USNM 336261. 109:0 – trochlea metatarsi IV without large trochlea accessoria. 106:0 tendon of musculus flexor hallucis longus not enclosed in bony canal

  


    


Daniel J. Field and Allison Y. Hsiang. 2018. A North American Stem Turaco, and the Complex Biogeographic History of Modern Birds. BMC Evolutionary Biology. 18:102.  DOI: 10.1186/s12862-018-1212-3
Feathered fruit-eater frozen in fossil form - tinyurl.com/ybmtujr9 @BMC_Series

    

Tuesday, January 16, 2018

[Entomology • 2018] Nymphister kronaueri • An Army Ant-associated Beetle Species (Coleoptera: Histeridae: Haeteriinae) with An Exceptional Mechanism of Phoresy


Nymphister kronaueri 
von Beeren & Tishechkin, 2017 


Abstract 
Background: 
For more than a century we have known that a high diversity of arthropod species lives in close relationship with army ant colonies. For instance, several hundred guest species have been described to be associated with the Neotropical army ant Eciton burchellii Westwood, 1842. Despite ongoing efforts to survey army ant guest diversity, it is evident that many more species await scientific discovery.

Results: 
We conducted a large-scale community survey of Eciton-associated symbionts, combined with extensive DNA barcoding, which led to the discovery of numerous new species, among them a highly specialized histerid beetle, which is formally described here. Analyses of genitalic morphology with support of molecular characters revealed that the new species is a member of the genus Nymphister. We provide a literature review of host records and host-following mechanisms of Eciton-associated Haeteriinae demonstrating that the new species uses an unusual way of phoretic transport to track the nomadic habit of host ants. Using its long mandibles as gripping pliers, the beetle attaches between the ants’ petiole and postpetiole. The beetles specifically attach to medium-sized ant workers, thus participating as hitchhikers in the regular colony emigrations of the single host species Eciton mexicanum Roger, 1863.

Conclusion: 
By providing tools for reliable species identification via morphology and DNA barcodes for hitherto unknown army ant guest species, we set the baseline for studies targeting the ecological and evolutionary dynamics in these species-rich host-symbiont communities.

Keywords: Phoresy, Social parasitism, Myrmecophile, Eciton, Host specificity, Nymphister, Army ants, Specialization, Symbiosis






Nymphister kronaueri 

Etymology. We dedicate this species to Daniel Kronauer, an avid field biologist and long-time army ant researcher, who discovered the species during an Eciton mexicanum s. str. colony emigration.

Distribution. Known only from the type locality, i.e. La Selva Biological Station, a lowland Atlantic rainforest in Costa Rica.

  

Conclusions
Despite the enduring efforts to explore the microcosm of army ant-associated arthropods, a large proportion of unknown biodiversity still exists today. Myrmecophile communities of army ant species other than E. burchellii and E. hamatum have not been intensively studied, and thus it can be expected that many more species with fascinating adaptations still await scientific discovery. The present study is an example demonstrating the benefits of a combined approach, using morphology and DNA barcodes, to discover and describe new species in ant-myrmecophile communities.


Christoph von Beeren and Alexey K. Tishechkin. 2017. Nymphister kronaueri von Beeren & Tishechkin sp. nov., An Army Ant-associated Beetle Species (Coleoptera: Histeridae: Haeteriinae) with An Exceptional Mechanism of Phoresy. BMC Zoology. 2:3.   DOI: 10.1186/s40850-016-0010-x

Newly discovered beetle catches a ride on the backs of army ants to get around  news.mongabay.com/2017/02/newly-discovered-beetle-catches-a-ride-on-the-backs-of-army-ants-to-get-around/ via @Mongabay
Newly discovered beetle species catches a ride on the back of army ants phy.so/405885610 via @physorg_com

    

Thursday, December 28, 2017

[Paleontology • 2017] Habelia optata [Habeliida, ord. nov.] • Mandibulate Convergence in An Armoured Cambrian Stem Chelicerate


Habelia optata  Walcott, 1912

Aria & Caron, 2017.

Abstract
Background
Chelicerata represents a vast clade of mostly predatory arthropods united by a distinctive body plan throughout the Phanerozoic. Their origins, however, with respect to both their ancestral morphological features and their related ecologies, are still poorly understood. In particular, it remains unclear whether their major diagnostic characters were acquired early on, and their anatomical organization rapidly constrained, or if they emerged from a stem lineage encompassing an array of structural variations, based on a more labile “panchelicerate” body plan.

Results
In this study, we reinvestigated the problematic middle Cambrian arthropod Habelia optata Walcott from the Burgess Shale, and found that it was a close relative of Sanctacaris uncata Briggs and Collins (in Habeliida, ord. nov.), both retrieved in our Bayesian phylogeny as stem chelicerates. Habelia possesses an exoskeleton covered in numerous spines and a bipartite telson as long as the rest of the body. Segments are arranged into three tagmata. The prosoma includes a reduced appendage possibly precursor to the chelicera, raptorial endopods connected to five pairs of outstandingly large and overlapping gnathobasic basipods, antennule-like exopods seemingly dissociated from the main limb axis, and, posteriorly, a pair of appendages morphologically similar to thoracic ones. While the head configuration of habeliidans anchors a seven-segmented prosoma as the chelicerate ground pattern, the peculiar size and arrangement of gnathobases and the presence of sensory/tactile appendages also point to an early convergence with the masticatory head of mandibulates.

Conclusions
Although habeliidans illustrate the early appearance of some diagnostic chelicerate features in the evolution of euarthropods, the unique convergence of their cephalons with mandibulate anatomies suggests that these traits retained an unusual variability in these taxa. The common involvement of strong gnathal appendages across non-megacheirans Cambrian taxa also illustrates that the specialization of the head as the dedicated food-processing tagma was critical to the emergence of both lineages of extant euarthropods—Chelicerata and Mandibulata—and implies that this diversification was facilitated by the expansion of durophagous niches.

Keywords: Arthropoda, Chelicerata, Convergence, Macroevolution, Cambrian, Burgess Shale






Fig. 7 Convergences in head anatomy and morphology between Habelia (a) and selected mandibulates, in this case Ianiropsis sp. (Malacostraca: Isopoda; b; © Buz Wilson, Australian Museum) and Henicops washpoolensis (Myriapoda: Chilopoda; c; image provided by G. Edgecombe). Colours highlight the morpho-functional correspondence between sensory appendages (exopods in Habelia vs. antennae in mandibulates; green), masticatory appendages (gnathobases in Habelia vs. mandibles and maxillae in mandibulates; orange) and complimentary appendages aiding in food manipulation (seventh head appendage in Habelia vs. maxillipeds in mandibulates; blue). Note that masticatory appendages in Henicops are hidden by the large coxosternites of the maxillipeds

Systematic palaeontology

Superphylum Panarthropoda Nielsen, 1995.
Phylum Euarthropoda Lankester, 1904.

Clade Arachnomorpha Heider, 1913 (= Arachnata Lauterbach, 1973).

Diagnosis (emended from Størmer, 1944). Euarthropods with the following characters: Cephalic shield encompassing at least four pairs of appendages with well-developed endopods; originally, presence along body of at least one pair of appendages with basipod differentiated into a well-sclerotized gnathal sclerite bearing setae or teeth (“gnathobasic appendage”); third gnathobasic cephalic appendage also part of groundplan; post-cephalic endopods terminating in a trident of claws with various arrangements.

Order Habeliida, ord. nov. Aria and Caron

Type family. Habeliidae Simonetta and Delle Cave, 1975.
Other included taxa. Sanctacarididae Legg and Pates, 2016.

Diagnosis. Arachnomorph arthropods with the following characters: Cephalic shield with sub-triangular, sub-horizontal pleural expansions and with antero-lateral notches accommodating pair of lateral compound eyes with no peduncle; cephalic shield with large mesio-dorsal bulge accommodating stomach; five pairs of anterior, slender and segmented antennule-like exopods likely inserted below the eyes and dorsally to other head appendages; on ventral side of head, reduced pair of appendages inserted anteriormost (presumed in Sanctacarididae), followed by five pairs of appendages composed of gnathobasic basipods increasing in size posteriad and bearing seven-segmented spinose/setose enditic endopods projecting anteriad; trunk bearing paddle-like exopods fringed with thin lamellae.

Remarks. We maintain the family Sanctacarididae erected by Legg and Pates [33], since 10 trunk segments and a spatulate telson remain diagnostic of Sanctacaris uncata, Utahcaris orion [33] and Wisangocaris barbarahardyae [35]. The affinity of Messorocaris magna [34] is less clear, but the peculiar shape of its trunk pleurae may place it in its own family.

Habelia had previously been assigned to the orders Aglaspina by Walcott and Emeraldellia by Størmer [36]. Given the lack of cladistic support for these taxa, which would be para- or polyphyletically nested within Arachnomorpha, the lack of redescription for Molaria, and the fact that their diagnoses should be extensively revised in light of the new data gathered on aglaspidids and Emeraldella, we have not reused Aglaspina or Emeraldellia herein.

Family Habeliidae Simonetta and Delle Cave, 1975.
Type genus. Habelia Walcott, 1912.


Diagnosis. Habeliidan euarthropods with the following characters: Body elongate, 19-segmented, divided into three distinct tagmata: cephalon (or “prosoma”) of seven segments (or eight somites) and trunk (12 segments) composed of a five-segmented thorax (or “mesosoma”) and eight-segmented post-thorax (or “metasoma”); trunk tagmatization based on discrete limb differentiation between thorax and post-thorax; posteriormost cephalic appendage (7th) similar to thoracic appendages, all characterized by a cheiromorph morphology: large undifferentiated basipods, well-developed seven-segmented endopods without endites, and paddle-like exopods fringed with oblanceolate lamellae; telson elongate.

Remarks. We hereby establish a diagnosis for the family Habeliidae, as the original publication of the taxon was not associated with one [39]; we also formalize diagnoses and descriptions for Habelia optata hereafter. The genus Thelxiope was also included in Habeliidae by Simonetta and Delle Cave; however, the presence of eight post-cephalic tergites and a pygidium would rather seem to indicate a relationship with Mollisonia [54, 55]. Thelxiope is therefore removed from Habeliidae.

Genus Habelia Walcott, 1912.
Type species. Habelia optata Walcott, 1912.

Diagnosis. Habeliid arthropod with the following characters: Post-ocular lateral and postero-lateral cephalic margins as well as pleural margins of trunk segments adorned with triangular spines; cuticular surface of cephalon and posterior portion of trunk segments richly adorned with small blunt spines/tubercles; cephalic gnathobases with elongate proximal “arm”; gnathobasic teeth differentiated antero-posteriorly (slender and long to short and stout); cephalic endopods with setal brush on podomeres 5 and 6; five-segmented thorax bearing strong biramous appendages with robust, clawed endopods and long basipods; very long (subequal to slightly greater than head and trunk length) bipartite telson, with a long, dentate proximal portion adorned with lateral spines, and a short distal portion about 1/3rd as long as proximal portion.


  


Cédric Aria and Jean-Bernard Caron. 2017. Mandibulate Convergence in An Armoured Cambrian Stem Chelicerate. BMC Evolutionary Biology. 17:261.   DOI: 10.1186/s12862-017-1088-7

A 508-million-year-old sea predator with a 'jackknife' head  phy.so/433048787 @physorg_com

Wednesday, December 6, 2017

[Paleontology • 2017] Ostromia crassipes [gen. nov.] • Re-evaluation of the Haarlem Archaeopteryx and the Radiation of Maniraptoran Theropod Dinosaurs


Ostromia crassipes (Meyer, 1857)

 “Haarlem specimen”, holotype of Ostromia crassipes (Meyer, 1857).
Counterslab, Teylers Museum TM 6929 (left) and main slab, TM 6928 (right).

Foth & Rauhut, 2017.  DOI:  10.1186/s12862-017-1076-y

Abstract
Background
Archaeopteryx is an iconic fossil that has long been pivotal for our understanding of the origin of birds. Remains of this important taxon have only been found in the Late Jurassic lithographic limestones of Bavaria, Germany. Twelve skeletal specimens are reported so far. Archaeopteryx was long the only pre-Cretaceous paravian theropod known, but recent discoveries from the Tiaojishan Formation, China, yielded a remarkable diversity of this clade, including the possibly oldest and most basal known clade of avialan, here named Anchiornithidae. However, Archaeopteryx remains the only Jurassic paravian theropod based on diagnostic material reported outside China.

Results
Re-examination of the incomplete Haarlem Archaeopteryx specimen did not find any diagnostic features of this genus. In contrast, the specimen markedly differs in proportions from other Archaeopteryx specimens and shares two distinct characters with anchiornithids. Phylogenetic analysis confirms it as the first anchiornithid recorded outside the Tiaojushan Formation of China, for which the new generic name Ostromia is proposed here.

Conclusions
In combination with a biogeographic analysis of coelurosaurian theropods and palaeogeographic and stratigraphic data, our results indicate an explosive radiation of maniraptoran coelurosaurs probably in isolation in eastern Asia in the late Middle Jurassic and a rapid, at least Laurasian dispersal of the different subclades in the Late Jurassic. Small body size and, possibly, a multiple origin of flight capabilities enhanced dispersal capabilities of paravian theropods and might thus have been crucial for their evolutionary success.

Keywords: Maniraptora, Anchiornithidae, Late Jurassic, Biogeography, Radiation



Fig. 1 Overview of the “Haarlem specimen”, holotype of Ostromia crassipes (Meyer, 1857). Counterslab, Teylers Museum TM 6929 (left) and main slab, TM 6928 (right). 



Systematic Palaeontology

Theropoda Marsh, 1881  
Maniraptora Gauthier, 1986 

Anchiornithidae tax. Nov.
Type genus. Anchiornis 
Xu, Zhao, Norell, Sullivan, Hone, Erickson, Wang, Han, and Gao, 2009  

Definition. Anchiornithidae is a stem-based taxon defined as all maniraptoran theropods that are more closely related to Anchiornis huxleyi than to Passer domesticus, Archaeopteryx lithographica, Dromaeosaurus albertensis, Troodon formosus, or Oviraptor philoceratops.


Ostromia gen. nov.

Ostromia crassipes von Meyer, 1857  
Holotype. Teylers Museum TM 6928, 6929, part and counterpart of a fragmentary skeleton.

Locality and horizon. Jachenhausen locality, near Riedenburg, Bavaria, Germany. Early Tithonian laminated limestones of the Painten Formation.

Etymology. The generic name honours the late John Ostrom, who identified the Haarlem specimen as a theropod.



Conclusions
A re-evaluation of one of the twelve skeletal specimens referred to the ‘Urvogel’ Archaeopteryx, the Haarlem specimen, revealed that this specimen represents a separate taxon, Ostromia crassipes. Phylogenetic analysis identifies Ostromia as the first representative of the basal avialian clade Anchiornithidae outside eastern Asia. In combination with a biogeographic analysis, a rapid radiation of maniraptoran theropods in eastern Asia with a subsequent dispersal of many lineages in the Late Jurassic is indicated; dispersal of maniraptorans was facilitated by small body size of basal members of all clades and, possibly, several independent acquisitions of flight capabilities. In the fragmenting world of Pangean break-up during the Late Jurassic and Cretaceous, increased dispersal potential might have been a key factor to explain the success of maniraptoran, and especially avialian theropods, with dispersal events being followed by endemic radiations of different clades.


Christian Foth and Oliver W. M. Rauhut. 2017. Re-evaluation of the Haarlem Archaeopteryx and the Radiation of Maniraptoran Theropod Dinosaurs. BMC Evolutionary Biology.   17:236. DOI:  10.1186/s12862-017-1076-y

 

Groot nieuws! De beroemde #Archaeopteryx van Teylers Museum blijkt nog ouder dan gedacht en wereldwijd uniek te zijn. Het is een fossiel van een nieuw ontdekte dinosaurussoort met veren, die de naam Ostromia heeft gekregen. #breakingnews http://bit.ly/2jdITeB  @TEYLERS

Paleontologists at LMU correct a case of misinterpretation: The first fossil “Archaeopteryx” to be discovered is actually a predatory dinosaur belonging to the anchiornithid family, which was previously known only from finds made in China: http://www.en.uni-muenchen.de/news/newsarchiv/2017/rauhut_archaeopteryx.html … @LMU_Muenchen


Tuesday, March 29, 2016

[Herpetology • 2016] The Eurasian Invasion: Phylogenomic Data reveal Multiple Southeast Asian Origins for Indian Dragon Lizards


A map showing the distribution of Draconinae and the four biogeographic area (differently-colored borders) used in ancestral range reconstructions.
 Credit: University of Kansas

Abstract

Background
The Indian Tectonic Plate split from Gondwanaland approximately 120 MYA and set the Indian subcontinent on a ~ 100 million year collision course with Eurasia. Many phylogenetic studies have demonstrated the Indian subcontinent brought with it an array of endemic faunas that evolved in situ during its journey, suggesting this isolated subcontinent served as a source of biodiversity subsequent to its collision with Eurasia. However, recent molecular studies suggest that Eurasia may have served as the faunal source for some of India’s biodiversity, colonizing the subcontinent through land bridges between India and Eurasia during the early to middle Eocene (~35–40 MYA). In this study we investigate whether the Draconinae subfamily of the lizard family Agamidae is of Eurasian or Indian origin, using a multi locus Sanger dataset and a novel dataset of 4536 ultraconserved nuclear element loci.

Results
Results from our phylogenetic and biogeographic analyses revealed support for two independent colonizations of India from Eurasian ancestors during the early to late Eocene prior to the subcontinent’s hard collision with Eurasia.

Conclusion
These results are consistent with other faunal groups and new geologic models that suggest ephemeral Eocene land bridges may have allowed for dispersal and exchange of floras and faunas between India and Eurasia during the Eocene.

Keywords: Agamidae, Draconinae, Eocene, Eurasia, India, Faunal exchanges, Landbridges



Fig. 3 a Time-calibrated Bayesian analysis of ND2 and RAG-1 data, with black dots denoting nodes with posterior probabilities above 0.95, followed by the estimated divergence time for each node in MYA. Pink circles identify nodes where topology was constrained based on Likelihood and species tree analyses of UCE data (Fig. 2B). Brown circles indicate the four species groups. Biogeographic distributions of contemporary samples follow area coding depicted in Fig. 1, with probability of areas at ancestral nodes from our Bayesian analysis in RevBayes. Inferred dispersal events into India are labeled D#1 and D#2, resulting in Indian or Indian/Sri Lankan Salea, Sitana, and Otocryptis. b Hypothesized position of the ISC and an early Eocene land bridge allowing for the first inferred dispersal event (D#1 in a) from Eurasia into India, 50–55 MYA. c. Hypothesized position of the ISC and a middle-late Eocene land bridge allowing for the second first inferred dispersal event (D#2 in a) from Eurasia into India between 35–50 MYA (paleomaps modified from Klaus et al. [2010])

Conclusions
The use of additional taxa, sequence-capture data, and newer geological models—all data not available to previous studies on Draconinae—resulted in novel and well-resolved relationships, leading to new biogeographic insights in this unique subfamily of lizards. Using these biogeographic insights and a broad comparison with previous biogeographic literature, we propose the Eocene Exchange Hypothesis, and the simple but well supported assumption that land bridges may have facilitated a broad-scale pattern of faunal exchange between the ISC and areas of Eurasia before its collision with Asia during the Eocene. We expect that with additional sampling of Indian and mainland Asian species, some factors that may have biased our biogeographic interpretations within the Draconinae to (i.e., Indian extinction events), can be evaluated. In addition, sampling of additional draconine species will allow us to test more fine-scaled hypotheses concerning dispersal and diversification within this group. Our phylogenomic analysis add to a growing body of knowledge addressing the effects of the ISC’s collision on biogeography and offers new ideas to be tested by future studies.

Jesse L. Grismer, James A. Schulte II, Alana Alexander, Philipp Wagner, Scott L. Travers, Matt D. Buehler, Luke J. Welton and Rafe M. Brown. 2016. The Eurasian Invasion: Phylogenomic Data reveal Multiple Southeast Asian Origins for Indian Dragon Lizards. BMC Evolutionary Biology. DOI:   10.1186/s12862-016-0611-6

Land bridges linking ancient India and Eurasia were 'freeways' for biodiversity exchange http://phy.so/378047593 via @physorg_com



Wednesday, May 20, 2015

[Paleontology • 2015] The Origin of Snakes: revealing the Ecology, Behavior, and Evolutionary History of Early Snakes using Genomics, Phenomics, and the Fossil Record


Reconstruction of the ancestral crown-group snake, based on the new study.
Artwork by Julius Csotonyi.

Abstract
Background
The highly derived morphology and astounding diversity of snakes has long inspired debate regarding the ecological and evolutionary origin of both the snake total-group (Pan-Serpentes) and crown snakes (Serpentes). Although speculation abounds on the ecology, behavior, and provenance of the earliest snakes, a rigorous, clade-wide analysis of snake origins has yet to be attempted, in part due to a dearth of adequate paleontological data on early stem snakes. Here, we present the first comprehensive analytical reconstruction of the ancestor of crown snakes and the ancestor of the snake total-group, as inferred using multiple methods of ancestral state reconstruction. We use a combined-data approach that includes new information from the fossil record on extinct crown snakes, new data on the anatomy of the stem snakes Najash rionegrina, Dinilysia patagonica, and Coniophis precedens, and a deeper understanding of the distribution of phenotypic apomorphies among the major clades of fossil and Recent snakes. Additionally, we infer time-calibrated phylogenies using both new ‘tip-dating’ and traditional node-based approaches, providing new insights on temporal patterns in the early evolutionary history of snakes.

Results
Comprehensive ancestral state reconstructions reveal that both the ancestor of crown snakes and the ancestor of total-group snakes were nocturnal, widely foraging, non-constricting stealth hunters. They likely consumed soft-bodied vertebrate and invertebrate prey that was subequal to head size, and occupied terrestrial settings in warm, well-watered, and well-vegetated environments. The snake total-group – approximated by the Coniophis node – is inferred to have originated on land during the middle Early Cretaceous (~128.5 Ma), with the crown-group following about 20 million years later, during the Albian stage. Our inferred divergence dates provide strong evidence for a major radiation of henophidian snake diversity in the wake of the Cretaceous-Paleogene (K-Pg) mass extinction, clarifying the pattern and timing of the extant snake radiation. Although the snake crown-group most likely arose on the supercontinent of Gondwana, our results suggest the possibility that the snake total-group originated on Laurasia.

Conclusions
Our study provides new insights into when, where, and how snakes originated, and presents the most complete picture of the early evolution of snakes to date. More broadly, we demonstrate the striking influence of including fossils and phenotypic data in combined analyses aimed at both phylogenetic topology inference and ancestral state reconstruction.

Keywords: Serpentes, Phylogeny, Ancestral state reconstruction, Divergence time estimation, Combined analysis, Fossil tip-dating


Allison Y Hsiang, Daniel J Field, Timothy H Webster, Adam DB Behlke, Matthew B Davis, Rachel A Racicot and Jacques A Gauthier. 2015. The Origin of Snakes: revealing the Ecology, Behavior, and Evolutionary History of Early Snakes using Genomics, Phenomics, and the Fossil Record. BMC Evolutionary Biology. DOI: 10.1186/s12862-015-0358-5.

Limbless triumph: The origin and diversification of snakes - http://go.shr.lc/1HsbUb8
What did the first snakes look like? http://phy.so/351261014 via @physorg_com
Data Suggests Legs and Toes in Ancestor of Living Snakes http://nyti.ms/1JxQewl