Thursday, May 23, 2013

[Paleontology • 2013] Albertadromeus syntarsus • New data on the diversity and abundance of small-bodied ornithopods (Dinosauria, Ornithischia) from the Belly River Group (Campanian) of Alberta, Canada | Small, speedy plant-eater extends knowledge of dinosaur ecosystems


a life reconstruction of the new small-bodied, plant-eating dinosaur Albertadromeus syntarsus
Art by Julius T. Csotonyi

Relative to large-bodied dinosaurs, the diversity of small-bodied dinosaurs from the Campanian of North America is poorly understood due to a lack of well-preserved skeletons. We document the first articulated remains, as well as the first cranial bones, of non-iguanodontian ornithopods from the Belly River Group of Alberta. The geologically oldest specimen consists of the posterior half of an articulated skeleton from the middle unit of the Oldman Formation and shares many anatomical features with the contemporaneous Orodromeus makelai and the older Oryctodromeus cubicularis. A second, younger specimen from the upper Oldman Formation is distinct from other ornithopods in having a reduced distal portion of the fibula that is fused to the anterior surface of the tibia; it is designated as the type of a new taxon, Albertadromeus syntarsus, gen. et sp. nov. Numerous isolated elements from small ornithopods from the Dinosaur Park Formation are also identified, but cannot be assigned to the generic level with confidence. Although small-bodied ornithopod material is rare, their known postcranial material outnumbers those of taphonomically equivalent and contemporaneous pachycephalosaurs, which are known to be abundant and diverse due to their robust and frequently recovered cranial domes. These findings suggest considerable undiscovered diversity of small-bodied ornithopods, and highlight biases against the preservation of small taxa in this system.

drawing of the lower jaw, as well as a complete tooth of Albertadromeus syntarsus

Type Species — Albertadromeus syntarsus, sp. nov.
Generic Etymology — Alberta (Canadian Province) and ‘dromeus’ (runner, Greek): ‘Alberta’ honors the Canadian province of Alberta where the only remains of the animal are currently known, and ‘dromeus,’ from the Greek for the inferred cursorial nature of this animal.
Diagnosis — As for type and only species.

Specific Etymology —Syn’ (together, Greek) and ‘tarsus’ (ankle, Greek): describing the autapomorphic condition of the distal fibula being reduced and fused to the distal tibia
Locality — Canal Creek, northern section of the Pinhorn Provincial Grazing Reserve, southern Alberta (Fig. 2). Detailed locality data on file with the TMP.



Skeletal outlines illustrate both the relative size and completeness of two of the small ornithopod, Albertadromeus, described in the paper. Bones indicated in white are present. Human (in gray) for scale.
 Illustration by C. Brown

Small, speedy plant-eater extends knowledge of dinosaur ecosystems

— Dinosaurs are often thought of as large, fierce animals, but new research highlights a previously overlooked diversity of small dinosaurs. In the Journal of Vertebrate Paleontology, a team of paleontologists from the University of Toronto, Royal Ontario Museum, Cleveland Museum of Natural History and University of Calgary have described a new dinosaur, the smallest plant-eating dinosaur species known from Canada. Albertadromeus syntarsus was identified from a partial hind leg, and other skeletal elements, that indicate it was a speedy runner. Approximately 1.6 m (5 ft) long, it weighed about 16 kg (30 lbs), comparable to a large turkey.

Albertadromeus lived in what is now southern Alberta in the Late Cretaceous, about 77 million years ago. Albertadromeus syntarsus means "Alberta runner with fused foot bones." Unlike its much larger ornithopod cousins, the duckbilled dinosaurs, its two fused lower leg bones would have made it a fast, agile two-legged runner. This animal is the smallest known plant-eating dinosaur in its ecosystem, and researchers hypothesize that it used its speed to avoid predation by the many species of meat-eating dinosaurs that lived at the same time.
Albertadromeus was discovered in 2009 by study co-author David Evans of the Royal Ontario Museum as part an on-going collaboration with Michael Ryan of the Cleveland Museum of Natural History to investigate the evolution of dinosaurs in the Late Cretaceous of North America. The known dinosaur diversity of this time period is dominated by large bodied plant-eating dinosaurs.

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Brown, CM, Evans, DC, Ryan, MJ, Russell, AP 2013. New data on the diversity and abundance of small-bodied ornithopods (Dinosauria, Ornithischia) from the Belly River Group (Campanian) of Alberta. Journal of Vertebrate Paleontology 33 (3): 495.

[Herpetology • 2013] Duttaphrynus chandai | Nagaland Montane Torrent Toad • A new species of Duttaphrynus (Anura: Bufonidae) from Nagaland state of Northeast India




Abstract
A new species of montane toad Duttaphrynus is described from Nagaland state of Northeast India. The new species is diagnosable based on following combination of characters: absence of preorbital, postorbital and orbitotympanic ridges, elongated and broad parotid gland, first finger longer than second and presence of a mid-dorsal line. The tympanum is hidden under a skin fold (in male) or absent (in female). The species is compared with its congers from India and IndoChina. We propose to consider Duttaphrynus wokhaensis as junior synonym of Duttaphrynus melanostictus.
Key words: Duttaphrynus chandai, Nagaland, New species


Duttaphrynus chandai 
Nagaland Montane Torrent Toad

Etymology: Named after Shyamal Kumar Chanda, a prominent Indian amphibian biologist.




Das A, Chetia M, Dutta SK, Sengupta S. 2013. A new species of Duttaphrynus (Anura: Bufonidae) from northeast India. Zootaxa. 3646:336-348.

[Herpetology • 2008] First record of a natural male hybrid of Bufo (Pseudepidalea) viridis Laurenti, 1768 and Bufo (Bufo) bufo Linneus, 1758 from Austria


Natural male hybrid of Bufo (Pseudepidalea) viridis LAURENTI, 1768
and Bufo (Bufo) bufo LINNEUS, 1758 from Perchtoldsdorf, Austria.
Photographs: M. Duda.

Natural hybridisation of Bufo (Pseudepidalea) viridis LAURENTI, 1768 and Bufo (Bufo) bufo LINNEUS, 1758 was reported occasionally from Germany, the Czech Republic and Italy. Additionaly, hybrids of both species were bred in the laboratory, hybrid spawn, tadpoles and toadlets from these two species are subject to high mortality. The obvious rareness of viable hybrids among Bufo (Pseudepidalea) viridis and Bufo bufo accords with the recent view of the parental species representing different genera (FROST et al. 2006). Nevertheless, there are documented records of adult hybrids in nature
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Key words: Amphibia: Anura: Bufonidae: Bufo (Pseudepidalea) viridis, Bufo (Bufo) bufo, natural hybridisation, Austria


Duda M. 2008. First record of a natural male hybrid of Bufo (Pseudepidalea) viridis Laurenti, 1768 and Bufo (Bufo) bufo Linneus, 1758 from Austria. Herpetozoa. 20: 184-186. http://www.vipersgarden.at/PDF/Duda_Bufo_Hybriden.pdf

Wednesday, May 22, 2013

[Marine Mammal • 2013] Pandemic H1N1 Influenza Isolated from Free-Ranging Northern Elephant Seals Mirounga angustirostris in 2010 off the Central California Coast | H1N1 Swine Flu Virus Found in Marine Mammals for the First Time


Northern Elephant Seals Mirounga angustirostris
photo: Mike Baird

Abstract

Interspecies transmission of influenza A is an important factor in the evolution and ecology of influenza viruses. Marine mammals are in contact with a number of influenza reservoirs, including aquatic birds and humans, and this may facilitate transmission among avian and mammalian hosts. Virus isolation, whole genome sequencing, and hemagluttination inhibition assay confirmed that exposure to pandemic H1N1 influenza virus occurred among free-ranging Northern Elephant Seals (Mirounga angustirostris) in 2010. Nasal swabs were collected from 42 adult female seals in April 2010, just after the animals had returned to the central California coast from their short post-breeding migration in the northeast Pacific. Swabs from two seals tested positive by RT-PCR for the matrix gene, and virus was isolated from each by inoculation into embryonic chicken eggs. Whole genome sequencing revealed greater than 99% homology with A/California/04/2009 (H1N1) that emerged in humans from swine in 2009. Analysis of more than 300 serum samples showed that samples collected early in 2010 (n = 100) were negative and by April animals began to test positive for antibodies against the pH1N1 virus (HI titer of ≥1:40), supporting the molecular findings. In vitro characterizations studies revealed that viral replication was indistinguishable from that of reference strains of pH1N1 in canine kidney cells, but replication was inefficient in human epithelial respiratory cells, indicating these isolates may be elephant seal adapted viruses. Thus findings confirmed that exposure to pandemic H1N1 that was circulating in people in 2009 occurred among free-ranging Northern Elephant Seals in 2010 off the central California coast. This is the first report of pH1N1 (A/Elephant seal/California/1/2010) in any marine mammal and provides evidence for cross species transmission of influenza viruses in free-ranging wildlife and movement of influenza viruses between humans and wildlife.



H1N1 Swine Flu Virus Found in Marine Mammals for the First Time

A team of researchers reporting in the journal PLoS ONE has detected the influenza H1N1 virus in Northern Elephant Seals (Mirounga angustirostris) off the central California coast.

Prof Tracey Goldstein from the University of California Davis’ One Health Institute and Wildlife Health Center, lead author of the study, said: “we thought we might find influenza viruses, which have been found before in marine mammals, but we did not expect to find pandemic H1N1. This shows influenza viruses can move among species.”

Between 2009 and 2011, the team tested nasal swabs from more than 900 marine mammals from 10 different species off the Pacific Coast from Alaska to California. They detected H1N1 infection in two northern elephant seals and antibodies to the virus in an additional 28 elephant seals, indicating more widespread exposure. Neither infected seal appeared to be ill, indicating marine mammals may be infected without showing clinical signs of illness.

“The findings are particularly pertinent to people who handle marine mammals, such as veterinarians and animal rescue and rehabilitation workers,” Prof Goldstein said. “They are also a reminder of the importance of wearing personal protective gear when working around marine mammals, both to prevent workers’ exposure to diseases, as well as to prevent the transmission of human diseases to animals.”

H1N1 originated in pigs. It emerged in humans in 2009, spreading worldwide as a pandemic. The World Health Organization now considers the H1N1 strain from 2009 to be under control, taking on the behavior of a seasonal virus.

“H1N1 was circulating in humans in 2009. The seals on land in early 2010 tested negative before they went to sea, but when they returned from sea in spring 2010, they tested positive. So the question is where did it come from?” Prof Goldstein said.


“When elephant seals are at sea, they spend most of their time foraging in the northeast Pacific Ocean off the continental shelf, which makes direct contact with humans unlikely.”

The seals had been satellite tagged and tracked, so the researchers knew exactly where they had been and when they arrived on the coast.

The first seal traveled from California on Feb. 11, 2010 to southeast Alaska to forage off the continental shelf, returning to Point Piedras Blancas near San Simeon, California, on April 24. The second seal left Ano Nuevo State Reserve in San Mateo County, Calif., on Feb. 8, 2010 traveling to the northeast Pacific and returning on May 5.

Infections in both seals were detected within days of their return to land.

“Exposure likely occurred in the seals before they reached land, either while at sea or upon entering the near-shore environment.”


 Goldstein T et al. 2013. Pandemic H1N1 Influenza Isolated from Free-Ranging Northern Elephant Seals in 2010 off the Central California Coast. PLoS ONE. 8 (5): e62259; doi: dx.doi.org/10.1371/journal.pone.0062259

[Herpetology / PaleoEcology • 2013] Crocodylian diversity peak and extinction in the late Cenozoic of the northern Neotropics | 14 closely related crocodiles existed around 5 million years ago


At least seven crocodile species lived alongside in the coastal areas of the Urumaco River in Venezuela.
(illustration: Jorge A. Gonzalez / UZH)

Northern South America and South East Asia are today’s hotspots of crocodylian diversity with up to six (mainly alligatorid) and four (mainly crocodylid) living species respectively, of which usually no more than two or three occur sympatrically. In contrast, during the late Miocene, 14 species existed in South America. Here we show a diversity peak in sympatric occurrence of at least seven species, based on detailed stratigraphic sequence sampling and correlation, involving four geological formations from the middle Miocene to the Pliocene, and on the discovery of two new species and a new occurrence. This degree of crocodylian sympatry is unique in the world and shows that at least several members of Alligatoroidea and Gavialoidea coexisted. By the Pliocene, all these species became extinct, and their extinction was probably related to hydrographic changes linked to the Andean uplift. The extant fauna is first recorded with the oldest Crocodylus species from South America.

Subject terms: Biological sciences, Ecology, Evolution, Palaeontology, Zoology



Crocodylus falconensis, a crocodile that assumably grew up to well over four meters long. (picture: UZH)

14 closely related crocodiles existed around 5 million years ago
14 species of crocodile lived in South America around 5 million years ago, at least seven of which populated the coastal areas of the Urumaco River in Venezuela at the same time. Paleontologists from the University of Zurich have found evidence of an abundance of closely related crocodiles that remains unparalleled to this day. As they were highly specialized, the crocodiles occupied different eco-niches. When the watercourses changed due to the Andean uplift, however, all the crocodile species became extinct.  

Two new fossil crocodile species discovered

While studying the wealth of fossil crocodiles from the Miocene in the Urumaco region, the scientists discovered two new crocodile species: the Globidentosuchus brachyrostris, which belonged to the caiman family and had spherical teeth, and Crocodylus falconensis, a crocodile that the researchers assume grew up to well over four meters long. As Sánchez and his team reveal, Venezuela's fossils include all the families of crocodile species that still exist all over the world today: the Crocodylidae, the so-called true crocodiles; the Alligatoridae, which, besides the true alligators, also include caimans; and the Gavialidae, which are characterized by their extremely long, thin snouts and are only found in Southeast Asia nowadays.

On account of the species' extremely different jaw shapes, the researchers are convinced that the different crocodilians were highly specialized feeders: With their pointed, slender snouts, the fossil gharials must have preyed on fish. "Gharials occupied the niche in the habitat that was filled by dolphins after they became extinct," Sánchez suspects. With its spherical teeth, however, Globidentosuchus brachyrostris most likely specialized in shellfish, snails or crabs. And giant crocodiles, which grew up to 12 meters long, fed on turtles, giant rodents and smaller crocodiles. "There were no predators back then in South America that could have hunted the three-meter-long turtles or giant rodents. Giant crocodiles occupied this very niche," explains Scheyer.

Andean uplift led to extinction

The unusual variety of species in the coastal and brackish water regions of Urumaco and Amazonas came to an end around 5 million years ago when all the crocodile species died out. The reason behind their extinction, however, was not temperature or climate changes – temperatures in the Caribbean remained stable around the Miocene/Pliocene boundary. Instead, it was caused by a tectonic event: "The Andean uplift changed the courses of rivers. As a result, the Amazon River no longer drains into the Caribbean, but the considerably cooler Atlantic Ocean," explains Sánchez. With the destruction of the habitat, an entirely new fauna emerged that we know from the Orinoco and Amazon regions today. In the earlier Urumaco region, however, a very dry climate has prevailed ever since the Urumaco River dried up.


Globidentosuchus brachyrostris belonged to the caiman family. With its spherical teeth they likely specialized in shellfish, snails or crabs. (picture: UZH)


Scheyer, T. M., Aguilera, O. A., Delfino, M., Fortier, D.C., Fortier, A. A., Sánchez, R., Carrillo-Briceño, J.D., Quiroz, L., Sánchez-Villagra, M.R. 2013. Crocodylian diversity peak and extinction in the late Cenozoic of the northern Neotropics. Nature Communications. http://dx.doi.org/10.1038/ncomms2940

14 closely related crocodiles existed around 5 million years ago

Hace nueve millones de años en Sudamérica vivían 14 especies de cocodrilos http://www.agenciasinc.es/Noticias/Hace-nueve-millones-de-anos-en-Sudamerica-vivian-14-especies-de-cocodrilos via @agencia_sinc

Sunday, May 19, 2013

[Paleontology • 2013] First occurrence of stomach stones in pterosaurs | gastroliths in filter-feeding pterodactyloid Pterodaustro guinazui from the Lower Cretaceous of Argentina




Two nearly complete skeletons of the filter-feeding pterodactyloid Pterodaustro guinazui from the Lower Cretaceous of Argentina exhibit clusters of poorly sorted coarse sand to fine gravel inside the abdominal cavity. These stones are interpreted as ingested gastroliths (geogastroliths), which are commonly found in a variety of archosaurs (including birds) but have never before been reported in a pterosaur. The geogastroliths found in these Pterodaustro specimens are interpreted as having assisted in the digestion of hard food items such as ‘shelled’ crustaceans that are abundant in the fossil beds of this pterosaur. One of these specimens with geogastroliths has anterior mandibular teeth that are notably thicker than the posterior teeth and are somewhat procumbent. We suggest that these teeth might have facilitated the apprehension of fine gravel.


La referencia completa es: Codorniú, L., Chiappe, L., Cid, F.D. 2013. First occurrence of stomach stones in pterosaurs. Journal of Vertebrte Paleontology, 33, 3, 647-54

[Paleontology • 2013] Kooteninchela deppi • Multi-Segmented Arthropods from the Middle Cambrian of British Columbia (Canada)





A new arthropod, Kootenichela deppi n. gen. n. sp., is described from the Stanley Glacier exposure of the middle Cambrian (Series 3, Stage 5) Stephen Formation in Kootenay National Park (British Columbia, Canada). This taxon possesses a number of primitive arthropod features such as an elongate, homonomous trunk (consisting of at least 29 segments), poorly sclerotised trunk appendages, and large pedunculate eyes associated with an anterior (ocular) sclerite. The cephalon encompasses a possible antenna-like appendage and enlarged raptorial appendages with a bipartite peduncle and three spinose distal podomeres, indicative of megacheiran (“great-appendage” arthropod) affinities. The relationships of megacheirans are controversial, with them generally considered as either stem-euarthropods or a paraphyletic stem-lineage of chelicerates. An extensive cladistic analysis resolved Kootenichela as sister-taxon to the enigmatic Worthenella cambria from the middle Cambrian (Series 3, Stage 5), Burgess Shale Formation in Yoho National Park (British Columbia), which is herein reinterpreted as a megacheiran arthropod. Based on their sister-group relationship, both taxa were placed in the new family Kootenichelidae, to which Pseudoiulia from the Chengjiang biota is also tentatively assigned. All of these taxa possess an elongate, multi-segmented body and subtriangular exopods. This family occupies a basal position within a paraphyletic Megacheira, the immediate outgroup of Euarthropoda (crown-group arthropods). The resultant topology indicates that analyses that have resolved megacheirans as stem-chelicerates have done so because they have rooted on inappropriate taxa, e.g., trilobitomorphs and marrellomorphs.






Etymology: 
The species name deppi comes from the actor Johnny Depp, after his role as Edward Scissorhands in the movie of the same name. David Legg, the discoverer of Kootenichela, said: 

“When I first saw the pair of isolated claws in the fossil records of this species I could not help but think of Edward Scissorhands. Even the genus name, Kootenichela, includes the reference to this film as ‘chela’ is Latin for claws or scissors. In truth, I am also a bit of a Depp fan and so what better way to honour the man than to immortalise him as an ancient creature that once roamed the sea?”


David Legg. 2013. Multi-Segmented Arthropods from the Middle Cambrian of British Columbia (Canada). Journal of Paleontology. (3): 493-501.

Meet the Kooteninchela deppi an ancient lobster-like beast with scissor claws that roamed the sea... http://bit.ly/12EoQVN via @MailOnline

Thursday, May 16, 2013

[Crustacea • 2013] Thampramon tonvuthi | ปูถ้ำพระ • a new genus and new species of cavernicolous crab (Decapoda: Brachyura: Potamidae) from northern Thailand


 Thampramon tonvuthi Ng & Vidthayanon 2013
photo: Nonn Panitvong

   


Abstract
A new genus and species of potamid cavernicolous crab, Thampramon tonvuthi sp. nov., is described from Thailand. While superficially similar to Tiwaripotamon Bott, 1970, Phaibulamon Ng, 1992, and Nemoron Ng, 1996, the new genus possesses a unique combination of morphological characters including a distinctive carapace form, possession of a relatively long third maxilliped exopod, long ambulatory legs and a unique male first gonopod.

Key words: Crustacea, Brachyura, Potamidae, taxonomy, cavernicoles, new genus, new species, Thailand



ปูสกุลใหม่ ชนิดใหม่ของโลก จากถ้ำพระวังแดง อช.ทุ่งแสลงหลวง จ.พิษณุโลก ตั้งชื่อวิทยาศาสตร์เพื่อเป็นเกียรติกับ นักต่อสู้เพื่อพิทักษ์เขาหินปูนแห่งเนินมะปราง คุณ พิทักษ์ โตนวุฒิ พื้นที่ใกล้เคียงกับถ้ำพระวังแดง คือพื้นที่ที่จะมีการสร้างเขื่อนคลองชมพู ใน EIA ยังไม่มีการศึกษาผลกระทบที่อาจจะเกิดขึ้นกับ ระดับน้ำถ้ำพระวังแดงแต่ประการใด ทั้งๆที่มีสัตว์คุ้มครองและเฉพาะถิ่นอาศัยอยู่ในถ้ำ อย่างน้อย 4 ชนิด คือ ปลาค้อถ้ำพระวังแดง ปลาพลวงถ้ำ ตุ๊กกายปล้องทอง และ ล่าสุดคือปูถ้ำพระ ซึ่งเป็นสัตว์เฉพาะถิ่นของระบบถ้ำในแถบนี้เท่านั้น 

ข้อมูลเพิ่มเติมของโครงการเขื่อนคลองชมพู

A new genus and new species of crap living in a cave system in Phitsanulok Prov., northern Thailand, has been discovered and scientifically described. The cave hydro system is now being threaten by a dam project in Chompu River close by.


 Ng, P.K.L. and Vidthayanon, C, 2013. Thampramon tonvuthi, a new genus and new species of cavernicolous crab (Crustacea: Decapoda: Brachyura: Potamidae) from Thailand. Zootaxa. 3652 (2): 265-276.

[Mammalogy / Conservation • 2013] Genetics and the last stand of the Sumatran rhinoceros Dicerorhinus sumatrensis | Rhino populations in Sumatra, Borneo should be combined to save Sumatran rhino from extinction


Puntung, a female Sumatran rhinoceros, in forest stockade in Sabah, Malaysian Borneo a day after her capture in December 2011.

Abstract
The Sumatran rhinoceros Dicerorhinus sumatrensis is on the brink of extinction. Although habitat loss and poaching were the reasons of the decline, today's reproductive isolation is the main threat to the survival of the species. Genetic studies have played an important role in identifying conservation priorities, including for rhinoceroses. However, for a species such as the Sumatran rhinoceros, where time is of the essence in preventing extinction, to what extent should genetic and geographical distances be taken into account in deciding the most urgently needed conservation interventions? We propose that the populations of Sumatra and Borneo be considered as a single management unit. 

Keywords: Dicerorhinus sumatrensis ; extinction; genetics; genome resource banking; Sumatran rhinoceros; threatened


Rhino populations in Sumatra, Borneo should be combined
to save Sumatran rhino from extinction

A new study argues for treating endangered Sumatran populations in Borneo and Sumatra as "a single conservation unit", lending academic support to a controversial proposal to move wild rhinos from Malaysia to Indonesia.

The paper, authored by an international team of rhino experts and published in the journal Oryx, says that genetic differences between the island populations are minimal. Given the dire straights of the species — the wild population is estimated at less than 100 individuals — the researchers argue that ensuring the Sumatran rhino's survival takes precedence over preserving what little genetic diversity remains between populations.

"In our paper, we discuss the pros and cons of considering the populations of Sumatran rhinoceros from Sumatra and Borneo as a single management unit," said study lead author Benoit Goossens, Director of the Danau Girang Field Centre in Malaysia, in a statement. "For a species such as the Sumatran rhinoceros, where time is of the essence in preventing extinction, we must ask to what extent should genetic and geographical distances be taken into account in deciding the most urgently needed conservation interventions."


Benoît Goossens et al, 2013. Genetics and the last stand of the Sumatran rhinoceros Dicerorhinus sumatrensis. Oryx. DOI: http://dx.doi.org/10.1017/S0030605313000045

[Herpetology • 2013] Batrachochytrium dendrobatidis (Bd) Infection and Lethal Chytridiomycosis in Caecilian Amphibians (Gymnophiona)


This Cameroon caecilian species, Geotrypetes seraphini, tested positive for the fungus that can cause the deadly chytrid disease chytridiomycosis in frogs, toads, newts and salamanders.

Abstract
Batrachochytrium dendrobatidis (Bd) is commonly termed the ‘amphibian chytrid fungus’ but thus far has been documented to be a pathogen of only batrachian amphibians (anurans and caudatans). It is not proven to infect the limbless, generally poorly known, and mostly soil-dwelling caecilians (Gymnophiona). We conducted the largest qPCR survey of Bd in caecilians to date, for more than 200 field-swabbed specimens from five countries in Africa and South America, representing nearly 20 species, 12 genera, and 8 families. Positive results were recovered for 58 specimens from Tanzania and Cameroon (4 families, 6 genera, 6+ species). Quantities of Bd were not exceptionally high, with genomic equivalent (GE) values of 0.052–17.339. In addition, we report the first evidence of lethal chytridiomycosis in caecilians. Mortality in captive (wild-caught, commercial pet trade) Geotrypetes seraphini was associated with GE scores similar to those we detected for field-swabbed, wild animals.

Keywords: Africa, Anura, Batrachia, Caudata, chytrid, pet trade, South America


Fatal fungus found in third major amphibian group, caecilians

It is known as the amphibian chytrid fungus and can cause a deadly disease that is decimating some of the world's frogs, toads, newts and salamanders. However, the fungus had not been detected in the other lesser-known major group of amphibians, the caecilians, until now.

An international team led by scientists at the Natural History Museum and Zoological Society of London (ZSL) have found the first cases of chytrid fungus infections in caecilians. They report their findings today in the journal EcoHealth.

More than 200 caecilians caught from the wild had DNA tests carried out on swabs of their skin to check for the amphibian chytrid fungus, Batrachochytrium dendrobatidis. The study included 29 caecilian species from 5 countries in Africa and South America, which is the largest genetic survey of this fungus in caecilians to date. 
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2013. Batrachochytrium dendrobatidis Infection and Lethal Chytridiomycosis in Caecilian Amphibians (Gymnophiona). EcoHealth. DOI: 10.1007/s10393-013-0831-9

[Herpetology • 2013] Prevalence of Batrachochytrium dendrobatidis in Xenopus Collected in Africa (1871–2000) and in California (2001–2010)


This is an African Clawed Frog (Xenopus laevis). These frogs, originally imported for early 20th century pregnancy tests, carried a deadly amphibian disease to the US, according to a new study published in the journal PLOS ONE. San Francisco State University biologist Vance Vredenburg and colleagues have found the first evidence of the Batrachochytrium dendrobatidis fungus among introduced feral populations in the US.
(Credit: Photo credit: Adam Bewick)

Abstract
International trade of the invasive South African clawed frog (Xenopus laevis), a subclinical carrier of the fungal pathogen Batrachochytrium dendrobatis (Bd) has been proposed as a major means of introduction of Bd into naïve, susceptible amphibian populations. The historical presence of Bd in the indigenous African population of Xenopus is well documented. However, there are no reports documenting the presence of Bd in wild Xenopus populations in the US, particularly in California where introduced populations are well-established after intentional or accidental release. In this report, a survey was conducted on 178 archived specimens of 6 species of Xenopus collected in Africa from 1871–2000 and on 23 archived specimens (all wild-caught Xenopus laevis) collected in California, USA between 2001 and 2010. The overall prevalence rate of Bd in the tested Xenopus was 2.8%. The earliest positive specimen was X. borealis collected in Kenya in 1934. The overall prevalence of Bd in the X. laevis collected in California was 13% with 2 positive specimens from 2001 and one positive specimen from 2003. The positive Xenopus (3/23) collected in California were collected in 2001 (2/3) and 2003 (1/3). These data document the presence of Bd-infected wild Xenopus laevis in California. The findings reported here support the prevailing hypothesis that Bd was present as a stable, endemic infection in Xenopus populations in Africa prior to their worldwide distribution likely via international live-amphibian trade.


Frog Once Used in Pregnancy Tests Spread Deadly Fungus 
A species of frog that was used from the 1930s to the 1950s in human pregnancy tests is a carrier of a deadly amphibian disease that is now threatening hundreds of other species of frogs and salamanders.

The species, the African clawed frog, was shipped across the world for use in human pregnancy tests, until a different method evolved for determining whether a woman is pregnant. Released to the wild, the frogs are now proving to be a threat to other animals on multiple continents.

“There are populations here in Golden Gate Park, in San Diego, Los Angeles, Europe, China, nearly everywhere,” said Vance Vredenburg, a conservation biologist at San Francisco State University and one of the researchers involved in the study, which was published on Wednesday in the journal PLoS One.

The pathogen the frogs are spreading is a fungus called Batrachochytrium dendrobatidis, or Bd. It has led to the recent decline or extinction of 200 frog species worldwide, the researchers report. Researchers in 2004 found Bd in a museum specimen of an African clawed frog that dated to 1934. But the frog itself appears to be unaffected by the fungus.

“Evolution has run its course,” Dr. Vredenburg said. “The species probably at some point suffered, but the survivors have figured out ways to survive.”

For other species, the pathogen is “the worst disease in vertebrate history,” Dr. Vredenburg said. The disease infects the skin of frogs and salamanders and causes it to thicken 40 times greater than normal, Dr. Vredenburg said. Within a couple of weeks, the disease causes an electrolyte imbalance and the amphibians die of heart attacks, he said.

Dr. Vredenburg and his colleagues tested museum specimens of the clawed frog at the California Academy of Sciences in San Francisco, and found evidence in swabbed DNA of the fungus in the preserved frogs’ skin. They also tested specimens in Africa collected between 1871 and 2010 and found that the disease was present in populations of the clawed frog before they were exported worldwide.

Thousands of African clawed frogs were shipped from South Africa to labs and hospitals around the world before the middle of the 20th century. In those days, some pregnancy tests involved injecting a woman’s urine into a female frog. If the frog began ovulating within about 10 hours, there was a high likelihood that the woman was pregnant.

The frogs are no longer imported to the United States for pregnancy testing, though they are still used for scientific research.


Vance T. Vredenburg, Stephen A. Felt, Erica C. Morgan, Samuel V. G. McNally, Sabrina Wilson, Sherril L. Green. 2013. Prevalence of Batrachochytrium dendrobatidis in Xenopus Collected in Africa (1871–2000) and in California (2001–2010). PLoS ONE. 8 (5): e63791 DOI: http://dx.doi.org/10.1371/journal.pone.0063791

Wednesday, May 15, 2013

[Paleontology • 2013] Malawania anachronus • A basal thunnosaurian from Iraq reveals disparate phylogenetic origins for Cretaceous ichthyosaurs | Fossil saved from mule track revolutionizes understanding of ancient dolphin-like marine reptile


Malawania anachronus,
the Jurassic-style Cretaceous ichthyosaur from Iraq.


Illustrations by Robert Nicholls, paleocreations.com;
coloring by C. M. Kosemen, cmkosemen.com

Abstract

Cretaceous ichthyosaurs have typically been considered a small, homogeneous assemblage sharing a common Late Jurassic ancestor. Their low diversity and disparity have been interpreted as indicative of a decline leading to their Cenomanian extinction. We describe the first post-Triassic ichthyosaur from the Middle East, Malawania anachronus gen. et sp. nov. from the Early Cretaceous of Iraq, and re-evaluate the evolutionary history of parvipelvian ichthyosaurs via phylogenetic and cladogenesis rate analyses. Malawania represents a basal grade in thunnosaurian evolution that arose during a major Late Triassic radiation event and was previously thought to have gone extinct during the Early Jurassic. Its pectoral morphology appears surprisingly archaic, retaining a forefin architecture similar to that of its Early Jurassic relatives. After the initial latest Triassic radiation of early thunnosaurians, two subsequent large radiations produced lineages with Cretaceous representatives, but the radiation events themselves are pre-Cretaceous. Cretaceous ichthyosaurs therefore include distantly related lineages, with contrasting evolutionary histories, and appear more diverse and disparate than previously supposed.

Keywords: Parvipelvia, Baracromia, Malawania anachronus, Early Cretaceous


Figure 1. Holotype specimen of Malawania anachronus gen. et sp. nov., NHMUK PV R6682.

Fossil saved from mule track revolutionizes understanding of ancient dolphin-like marine reptile
| An international team of scientists have revealed a new species of ichthyosaur (a dolphin-like marine reptile from the age of dinosaurs) from Iraq, which revolutionises our understanding of the evolution and extinction of these ancient marine reptiles.

Fischer V, Appleby RM, Naish D, Liston J, Riding JB, Brindley S and Godefroit P. 2013. A basal thunnosaurian from Iraq reveals disparate phylogenetic origins for Cretaceous ichthyosaurs. Biology Letters, 9: 20130021. http://dx.doi.org/10.1098/rsbl.2013.0021